DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and slp2

DIOPT Version :10

Sequence 1:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster


Alignment Length:355 Identity:108/355 - (30%)
Similarity:135/355 - (38%) Gaps:118/355 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RPSRESYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSF 67
            :|.::..|.:||||||.:|..|||..|.||.|.|:.||::|....||||.|.|.||||:|||||.
  Fly   170 KPVKDKKGNEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSL 234

  Fly    68 NDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSL--LRRR----KRFKLHKNDKDLLNEELTAL 126
            |.||:||||..|.||||.||.|.|.|.|:|..||.  ||||    .|.:|....:.|:......|
  Fly   235 NKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLAAFKRSLIGPMFPGL 299

  Fly   127 ANLNRFFFTTRNGGSAAHMSPLDMNNAAAM--RLDPL-PRSTAHMPNSLGPGVP-LPHVMPASMS 187
            |...:|       |......|...:..|:|  |.:|. |:.        |||.| ||..:|    
  Fly   300 AAYPQF-------GQFLTYPPTAPSLLASMYQRYNPFAPKG--------GPGHPGLPPGLP---- 345

  Fly   188 GADHTNLADMGLTNLPALTSSEIEGPLSLRPKRSFTIESLITPDKPEHPSEDEDDEDDRVDIDVV 252
                      ||...|.     .:||                |..|..|                
  Fly   346 ----------GLPGPPG-----PQGP----------------PGPPPPP---------------- 363

  Fly   253 ECSGISRYPTTPAASEEY------------------------MSASRSSRTEDPLPPMHTINAGA 293
                   :...|.:||.|                        :|.:.:|....| ||.|      
  Fly   364 -------FVAPPTSSELYQRLQYQQLLHQHAAAAALAAHQRQLSVAAASAASQP-PPTH------ 414

  Fly   294 HVPFLHYATGANVAGLPASGIPNSPTTYEL 323
            |.|  |.|.|.  |.|...|....|:...|
  Fly   415 HHP--HLAVGQ--APLSPGGDSPGPSPQPL 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 61/112 (54%)
slp2NP_476834.1 FH_FOXG 180..258 CDD:410795 48/77 (62%)

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