Protein Alignment fd96Ca and foxa3

DIOPT Version :10

• Sequence 1: NP_524495.1
• Gene: fd96Ca / 43010
• FlyBaseID: FBgn0004897
• Length: 372
• Species: Drosophila melanogaster
• Sequence 2: NP_571374.1
• Gene: foxa3 / 30559
• ZFINID: ZDB-GENE-980526-423
• Length: 441
• Species: Danio rerio
• Alignment Length: 342
• Identity: 120/342 - (35%)
• Similarity: 168/342 - (49%)
• Gaps: 66/342 - (19%)

  Fly     1 MPRPSRESYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNL 65
            ||:|.|.|....|||||||||..|||..|..|||.|::||::|.|.|||||:|.||||||:||:|
Zfish   131 MPKPYRRSLTHAKPPYSYISLITMAIQQSQSKMLTLNEIYQWIMDLFPYYRENQQRWQNSIRHSL 195

  Fly    66 SFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHK----------------- 113
            ||||||:||.|.||:||||:||||||.:.:|||||..|||:||||:.:
Zfish   196 SFNDCFVKVARSPDKPGKGSYWALHPNSGNMFENGCYLRRQKRFKIEEKAGKKSSSKSQDGSSTK 260

  Fly   114 --NDKDLLNEELTALANLNRFFFTTRNGGSAAHM------SPLDMNNAAAMRLDPLPRSTAHMPN 170
              :..:.:.||.:..        |..:|..:||.      |..:....:.::||    ..:..||
Zfish   261 GTHSSEGMQEEHSPT--------TGSDGAESAHSDSSHAGSTSEEQQRSLVQLD----CPSQAPN 313

  Fly   171 SL-GPGVPLPHVMPASMSGADHTNLADMGLTNLPALTSSEI------EGPL-SLRPKRSFTIESL 227
            .| ...||:|..:.|||..:. ::|...|:.|.|.|..|.:      ..|| |:.|..:|.....
Zfish   314 LLHSSPVPIPSSVSASMPPSS-SHLHSQGMGNSPHLLGSPMHHLDLQNDPLKSMDPHFNFNHPFS 377

  Fly   228 ITPDKPEHPSEDEDDEDDRVDIDVVECSGISRYPTTP--AASEEYMSASRSSRTEDPLPPMHTIN 290
            ||.........|.....|:|       ...:.|.|:.  ||.:.|.:|..|:           |:
Zfish   378 ITNLMSNEQKMDLKSYQDQV-------MAYNSYATSSPVAAKQIYDNAGPSA-----------ID 424

  Fly   291 AGAHVPFLHYATGANVA 307
            :||:...|:..:..|.:
Zfish   425 SGAYYQTLYSRSVLNAS 441

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fd96Ca	NP_524495.1	FH_FOX	1..110	CDD:469596	72/108 (67%)
foxa3	NP_571374.1	Forkhead_N	17..142	CDD:369872	5/10 (50%)
		FH_FOXA3	141..242	CDD:410814	69/100 (69%)
		HNF_C	373..>408	CDD:430552	7/41 (17%)