DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and foxd2

DIOPT Version :10

Sequence 1:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_571346.2 Gene:foxd2 / 30525 ZFINID:ZDB-GENE-980605-6 Length:369 Species:Danio rerio


Alignment Length:270 Identity:102/270 - (37%)
Similarity:137/270 - (50%) Gaps:45/270 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVPRR 77
            |||||||:|..|||..||:|.|.||:|.:||::||||||:....||||:|||||.||||:|:||.
Zfish    95 KPPYSYIALITMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPRE 159

  Fly    78 PDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKNDKDLLNEELTALANLNRFFFTTRNGGSA 142
            |..||||.||.|.|::.|||:|||.||||||||.|:.: ::|.|   |...|..|.:     |..
Zfish   160 PGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRHQTN-EILRE---AGGFLPGFGY-----GPY 215

  Fly   143 AHMSPLDMNNAAAMRLDPLPRSTAHMPNSLGPGVPLPHV-----MPASMSGADHTNLADMGLTNL 202
            .:...|.:.|..|..        .:.|:..|...|..:.     .|:|:....|         :|
Zfish   216 GYNYGLQLQNFHAHH--------PYHPHHPGSAFPFQNTHCALPTPSSIFSTPH---------SL 263

  Fly   203 PALTSSEIEGPLSLRPKRSFTIESLITPDK-----PEHPSEDEDDEDDRVDIDVVECSGISRYPT 262
            |:...:|:..|  ..|:.|.|:..| .|.|     |..||...|      :|.....|..|.|.|
Zfish   264 PSFLGTELRKP--FYPQLSPTLPGL-APLKTDTNGPSRPSFSID------NIIGAASSPASPYTT 319

  Fly   263 TPAASEEYMS 272
            .||...:.::
Zfish   320 QPAGQAQILA 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 63/96 (66%)
foxd2NP_571346.2 FH_FOXD1_D2-like 95..193 CDD:410820 64/97 (66%)

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