DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd96Ca and Foxk1

DIOPT Version :10

Sequence 1:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001032296.2 Gene:Foxk1 / 304298 RGDID:1309643 Length:719 Species:Rattus norvegicus


Alignment Length:412 Identity:102/412 - (24%)
Similarity:151/412 - (36%) Gaps:126/412 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVP 75
            |.||||||..|...||.|:.::.|.||.||..||..:||||...:.||||:|||||.|..|||||
  Rat   289 ESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVP 353

  Fly    76 RRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR----FK---------------LH--------- 112
            |..:.||||::|.:.|.:.......:..:||:|    |:               .|         
  Rat   354 RSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFGPLSSRSAPASPTHPGLMSPRSS 418

  Fly   113 ---------------KNDKDLLNEELTALANLNRFFFTTRNGGSAAHMSPLDMNNAAAMRLDPLP 162
                           .:|.||.::    ||::..:.::....||.....|:      .|.:.|.|
  Rat   419 GLQTPECLSREGSPIPHDPDLGSK----LASVPEYRYSQSAPGSPVSAQPV------IMAVPPRP 473

  Fly   163 -----RSTAHMPNSL----------------GPGVPLPHVMPASMSGADHTNLADMGLTNLPALT 206
                 :..|:||.|:                .|.|.:..|:..|.:.|:...||..|.|    .|
  Rat   474 SNLVAKPVAYMPASIVTSQQPSGHAIHVVQQAPTVTMVRVVTTSANSANGYILASQGST----AT 534

  Fly   207 SSEIEGP-----------LSLRPKRSF-----------TIESLITPDKPEH------PSEDEDDE 243
            |.:..|.           |..:|..:|           |:.|.:.|..|.|      |:......
  Rat   535 SHDTAGTAVLDLGNEARGLEEKPTIAFATIPAASRVIQTVASQMAPGVPGHTVTILQPATPVTIG 599

  Fly   244 DDRVDIDVVECSGISRYPTTPAASEEY--------MSASRSSRT------------EDPLPPMHT 288
            ...:.:..|..:|....||.......|        ::|..||.|            |:|...:..
  Rat   600 QHHLPVRAVTQNGKHAVPTNNLTGNAYALTSPLQLLAAQASSSTPVVITRVCEVGPEEPTAAVSV 664

  Fly   289 INAGAHVPFLHYATGANVAGLP 310
            ..:.|..|.:...|.|:.:|.|
  Rat   665 AASAAPTPAISTTTSASSSGEP 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 47/102 (46%)
Foxk1NP_001032296.2 FHA_FOXK1 89..191 CDD:438774
FH_FOXK1 289..389 CDD:410828 47/99 (47%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.