DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd96Ca and sep1

DIOPT Version :10

Sequence 1:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_596301.1 Gene:sep1 / 2540866 PomBaseID:SPBC4C3.12 Length:663 Species:Schizosaccharomyces pombe


Alignment Length:525 Identity:129/525 - (24%)
Similarity:191/525 - (36%) Gaps:181/525 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVPR 76
            :||||||..|..|:|..||::.|.||.||.:|::.|.:|.|:...||||:|||||.|..|:|:.|
pombe   127 KKPPYSYAMLIGMSIIRSPDRRLTLSAIYDWISNTFSFYNKSNNGWQNSIRHNLSLNKAFMKIER 191

  Fly    77 RPDRPGKGAYWALHPQAFDMFENGSLLRRRK---------------------------RFKLHKN 114
            ..:.||||.:|::.|...:.|..   |:.||                           .|.....
pombe   192 PRNLPGKGHFWSIRPGHEEQFLK---LKLRKPGVNSRPAPPVQDVTSSTKYGSSTGSSGFNTFNT 253

  Fly   115 DKDLLNEELTALANLNRFFFT-------TRNGGSAAHMSPL-----------------------D 149
            ...:.|:....|.|    ::|       |.:..:|.:..||                       |
pombe   254 SPHIFNQRHQYLQN----YYTASLTNIPTISNVNATNFHPLHSQQPYVDTPGIDAPSDLEAKFSD 314

  Fly   150 MNNAAAMRL-DPL-------------PRSTAHMPNSL-------------------GP--GVPLP 179
            :..::.:.: .||             |.|:|....||                   .|  |.|:.
pombe   315 LGVSSVVSVTSPLQSCTNSPSPPLSSPASSASPSESLRNESLGIKSAKSLGLNKDDAPVEGPPVS 379

  Fly   180 HVMPASMSGADH----------TNLADMGL----TN--------LPALTSS-EIEGPLSLRPKRS 221
            |:.....:.:.|          |||...||    ||        ||:|.|| .|:.|..|..|||
pombe   380 HLEKDVETPSVHDSVLGFNDTVTNLGKKGLKDGTTNTLQIPAVRLPSLPSSPTIKNPSGLLLKRS 444

  Fly   222 FTIESLITPDKPEHPS----EDEDDEDDRVDIDVV-----ECSGISRYP---------------T 262
            .:|: ..||.|...|.    .|:...||.....::     :.||||..|               .
pombe   445 NSID-FPTPPKALCPKLFCFRDDIVADDYTKFSLLSPIRSDMSGISASPNTNLKEHRTRILQMLA 508

  Fly   263 TPAASEEYMSASRSSRTE----DPLPPMHTINAGAHVPF----------------LHYATG--AN 305
            ||.|.:  :|:..||..|    .||......|..|....                |.|.|.  ::
pombe   509 TPDAKQ--LSSLTSSDAEFWSVTPLKSSILRNGDASKQVTLSESPKGDSLLDGGSLSYFTNNISS 571

  Fly   306 VAGLPA-SGIPNSPT--TYELAISHPLFMMAAPIANMHNIYYNNVTLVAPAQQYRSPEVQNRIDN 367
            ||||.. |.:|.|.:  |:|.....|:.|::   ...|...:|:...|:|.::    ||:.:..:
pombe   572 VAGLETPSKLPMSKSFDTFEDDFLDPMDMLS---FENHFSDFNSNRKVSPVKR----EVRRKYIS 629

  Fly   368 DMRTI 372
            ...||
pombe   630 SATTI 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 43/124 (35%)
sep1NP_596301.1 COG5025 20..663 CDD:227358 129/525 (25%)

Return to query results.
Submit another query.