DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and Foxi2

DIOPT Version :10

Sequence 1:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001406478.1 Gene:Foxi2 / 246073 RGDID:621739 Length:311 Species:Rattus norvegicus


Alignment Length:202 Identity:73/202 - (36%)
Similarity:103/202 - (50%) Gaps:38/202 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GEQ------KPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFN 68
            |:|      :|||||.:|.||||.|:|.:.|.||.||:::...||:|:::...||||:|||||.|
  Rat    90 GQQELLRLVRPPYSYSALIAMAIQSAPLRRLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLN 154

  Fly    69 DCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKR---------------FKLHKNDKDL 118
            |||.||||..:.||||.||.|.|....||:||:..|:|:|               .:.......|
  Rat   155 DCFKKVPRDENDPGKGNYWTLDPNCEKMFDNGNFRRKRRRRGETSEAAVPGASRPERAALEPSGL 219

  Fly   119 LNEEL---------TALANLNRFFFTTRNGGSAAHMS--PLDMNNAAAMRLDPLPRS-TAHMPNS 171
            ::::|         .|.|.|:.  |:|..|..|...|  |..:....::|..|...| ...:||:
  Rat   220 VSQDLQTSPSPTAPEAAACLSS--FSTALGALAGGFSTLPDGLPQDFSLRRPPTESSRRPQIPNT 282

  Fly   172 ---LGPG 175
               .|||
  Rat   283 SPGFGPG 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 54/120 (45%)
Foxi2NP_001406478.1 FH_FOX 96..188 CDD:469596 49/91 (54%)

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