DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and Foxj3

DIOPT Version :10

Sequence 1:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_766287.1 Gene:Foxj3 / 230700 MGIID:2443432 Length:623 Species:Mus musculus


Alignment Length:427 Identity:106/427 - (24%)
Similarity:164/427 - (38%) Gaps:123/427 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ESYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCF 71
            :.:.:.||||||.||...||.|||:|.:.||:||::|.|.|||||:....|:||:|||||.|.||
Mouse    72 QQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCF 136

  Fly    72 IKVPRRPDRPGKGAYWAL--HPQAFDMFENGSLLRRRKRFKL-------HKNDKDLLNEE----- 122
            :||||..|.||||:|||:  :|:     |:....|.:||.:.       :..|.|.|..|     
Mouse   137 LKVPRSKDDPGKGSYWAIDTNPK-----EDTLPTRPKKRARSVERASTPYSIDSDSLGMECIISG 196

  Fly   123 -------LTALANLNRFFFTTRNGGSAAHMSPLDMNNA------AAMRLDPLPRSTAHMPNSLGP 174
                   :..:.|....:...::|..:...|   :||:      |::.|:.:....::.|.:..|
Mouse   197 SASPTLAINTVTNKVTLYNADQDGSDSPRSS---LNNSLSDQSLASVNLNSVGSVHSYTPVTNHP 258

  Fly   175 GVPLPHVMPASMSGADHT--------------------------------NLADMGLTNLPALTS 207
            ......:.|.......:.                                :|:..||.::|:.:|
Mouse   259 EPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNFEDLSASFRSLYKSVFEQSLSQQGLMSIPSESS 323

  Fly   208 SEIEGPLSLRPKRSFTIESLITPDKPEHPSEDEDDEDDRVDIDVVECSGISRYPTTPAASEEYMS 272
            .:.....|.:...|.|:.|        ||..::....:       ..||:|     ...|.....
Mouse   324 QQSHTSCSYQHSPSSTVTS--------HPHSNQSSLPN-------NHSGLS-----ATGSNSVAQ 368

  Fly   273 ASRSSRTEDPLPPMHTINAGAHVPFLHYATGANVAGLPASGIPNSPTTYELAISHPLFMMAAPIA 337
            .|.|.....|.|..||    .|.|.          |||..  |..|       .||     ||..
Mouse   369 VSLSHPQMHPQPSPHT----PHRPH----------GLPQH--PQRP-------QHP-----APHP 405

  Fly   338 NMHNIYYNNVTLVAPAQQYRSP--EVQNRIDNDMRTI 372
            ..|:      .|..|..|:..|  .:|:..::..:|:
Mouse   406 QQHS------QLQPPHSQHPPPHQHIQHHPNHQHQTL 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 53/104 (51%)
Foxj3NP_766287.1 COG5025 <54..347 CDD:227358 78/290 (27%)
FH_FOXJ2-like 78..154 CDD:410798 47/75 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..178 13/39 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 248..275 3/26 (12%)
PAT1 <311..>434 CDD:401645 37/176 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..451 36/175 (21%)

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