DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and Foxe1

DIOPT Version :10

Sequence 1:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_620264.1 Gene:Foxe1 / 192274 RGDID:621723 Length:370 Species:Rattus norvegicus


Alignment Length:320 Identity:109/320 - (34%)
Similarity:147/320 - (45%) Gaps:80/320 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVPRR 77
            |||||||:|.||||..:||:.|.|..||||||:|||:||.|.::||||:||||:.||||:|:||.
  Rat    54 KPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPRE 118

  Fly    78 PDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKNDKDLLNEELTALANLNRFFFTTRNGGSA 142
            ..|||||.||||.|.|.||||:||.||||||||               .::|:.:          
  Rat   119 AGRPGKGNYWALDPNAEDMFESGSFLRRRKRFK---------------RSDLSTY---------- 158

  Fly   143 AHMSPLDMNNAAAMRLDPLPRSTAHMPNSLGPGVPLPHVMPASMSGADHTNLADMGLTNLPALTS 207
                |..|::|||        :.|....::.||. :|...|| ..||.:...|.......|....
  Rat   159 ----PAYMHDAAA--------AAAAAAAAIFPGA-VPAARPA-YPGAVYAGYAPPLAAPPPVYYP 209

  Fly   208 SEIEGPLSLRPKRSFTIESLITPDKPEHPSEDEDDEDDRVDIDVVECSGISRYPTTPAASEEYMS 272
            :...||.     |.|.    :.|::|..|.                   :...|:....|..:.:
  Rat   210 AASPGPC-----RVFG----LVPERPLSPD-------------------LGPAPSAAGGSCAFAA 246

  Fly   273 ASRSSRTEDPLPPMHT----INAGAHV-----PFLHYATGANVAGLPAS----GIPNSPT 319
            |:.:..|....|.:.|    :|..|:.     |...|..||:.|...|:    ..|.|||
  Rat   247 AAGAPGTGSFQPAVCTGARPVNPAAYAAAYAGPDGAYPQGASSALFAAAAGRLAGPTSPT 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 66/96 (69%)
Foxe1NP_620264.1 FH_FOXE 54..142 CDD:410793 58/87 (67%)

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