DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and pha-4

DIOPT Version :9

Sequence 1:NP_001287516.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001041114.1 Gene:pha-4 / 180357 WormBaseID:WBGene00004013 Length:506 Species:Caenorhabditis elegans


Alignment Length:235 Identity:93/235 - (39%)
Similarity:123/235 - (52%) Gaps:41/235 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCFI 72
            :||:.|||||||||..|||..|..:.|.||:||.:|.|.||||:.|.||||||:||:|||||||:
 Worm   231 TYGQSKPPYSYISLITMAIQKSNSRQLTLSEIYNWIMDLFPYYQNNQQRWQNSIRHSLSFNDCFV 295

  Fly    73 KVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFK-----------------LHKND----K 116
            ||.|.||:||||::|.||....:|||||..|||:||||                 ||:..    .
 Worm   296 KVARSPDKPGKGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSRKKRNANSQQLHQQQHIPKM 360

  Fly   117 DLLNEELTALANLNRFFFTTRNGGSAAHMSPLDMNNAAAMRLDPLPRSTAHMPNSLG----PGVP 177
            ::..|:.|::.       ||.:.|:.:.:..:.........|..:..:||...| ||    .|.|
 Worm   361 EIKEEDPTSIT-------TTSSLGAYSLIPQISTKKEIKEELKAVQDATAAAAN-LGLIDPSGTP 417

  Fly   178 --LPHVMPASM---SGADHTNLADMGLTN---LPALTSSE 209
              :.|..|.|:   .|...|..|.|.|..   .|.|.||:
 Worm   418 SAVNHSQPTSVISSVGTLGTTQAQMTLNGQYASPYLYSSD 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_001287516.1 FH 13..101 CDD:214627 56/87 (64%)
pha-4NP_001041114.1 FH 236..324 CDD:214627 56/87 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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