DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and Foxd2

DIOPT Version :9

Sequence 1:NP_001287516.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_032619.1 Gene:Foxd2 / 17301 MGIID:1347471 Length:492 Species:Mus musculus


Alignment Length:272 Identity:100/272 - (36%)
Similarity:127/272 - (46%) Gaps:46/272 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PRPSRESYGEQ------KPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNS 60
            |.|...|.|..      |||||||:|..|||..||:|.|.||:|.:||:.||||||:....||||
Mouse   112 PGPGPPSGGAATRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNS 176

  Fly    61 LRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKL----------HKND 115
            :|||||.||||:|:||.|..||||.||.|.|::.|||:|||.||||||||.          |.:.
Mouse   177 IRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHP 241

  Fly   116 KDLLNEELTALANLNRFFFTTRNGGSAAHMSPLDMNNAAAMRLDPLPRSTAHMPNSLG------- 173
            :.||.....|..:...|..:....|:..:...|.:....|....|.|....| |::..       
Mouse   242 ELLLRGGAAAAGDPGAFLSSFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPH-PHAFAFAATAPC 305

  Fly   174 -------------PGVPLPHVMPASMSGADHTNLADMGLT--NLPALTSSEIEG------PLSLR 217
                         ||.|...|..::.|..........|.:  .|||...:|: |      |.||.
Mouse   306 QLSVPPGRAAAPPPGPPTASVFASAASAPAPAPAPGSGPSPAGLPAFLGAEL-GCAKAFYPASLS 369

  Fly   218 PKRSFTIESLIT 229
            |..:.|..||.|
Mouse   370 PPAAGTAASLST 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_001287516.1 FH 13..101 CDD:214627 55/87 (63%)
Foxd2NP_032619.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 13..125 4/12 (33%)
Forkhead 129..215 CDD:278670 54/85 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..344 5/34 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 394..441
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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