DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and Foxj1

DIOPT Version :9

Sequence 1:NP_001287516.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_032266.3 Gene:Foxj1 / 15223 MGIID:1347474 Length:421 Species:Mus musculus


Alignment Length:336 Identity:98/336 - (29%)
Similarity:127/336 - (37%) Gaps:84/336 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PRPSRESYGEQ---KPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRH 63
            |.|....|...   ||||||.:|..||:.:|....:.||.|||:|||.|.|:|.....||||:||
Mouse   107 PPPDDVDYATNPHVKPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRH 171

  Fly    64 NLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRR-------KRFKLHKNDKD---- 117
            |||.|.|||||||..|.||||.:|.:.||..:...:|:..:||       ..|....:.:.    
Mouse   172 NLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFARQASQEPSAAP 236

  Fly   118 -----LLNEELTALANLNRFFFTTRNGGSAAHMSPLDMNNAAAMRLDPLPRSTAHM---PNSL-- 172
                 .:|.|...|  |..|...|..||.......|     ...|..|||:..|.:   |::|  
Mouse   237 WGGPLTVNREAQQL--LQEFEEATGEGGWGTGEGRL-----GHKRKQPLPKRVAKVLRPPSTLLL 294

  Fly   173 -----GPGVPLPHVMPASMSGADHTNLADMGL--TNLPALTSSEIEGPLSLRPKRSFTIESLITP 230
                 |...||       ....|...:.:.|.  ..|.:|...|:..|||               
Mouse   295 TQEEQGELEPL-------KGNFDWEAIFEAGALGEELSSLEGLELSPPLS--------------- 337

  Fly   231 DKPEHPSEDEDDEDDRVDIDV----VECSGISRYPTTPAA-----SEEYMSASRSSRTEDP---- 282
                 ||...|     ||:.|    :.|......|...||     .|.:::.|......|.    
Mouse   338 -----PSSHGD-----VDLTVHGRHINCPATWGPPAEQAADSLDFDETFLATSFLQHPWDESGSG 392

  Fly   283 -LPPMHTINAG 292
             |||.....||
Mouse   393 CLPPEPIFEAG 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_001287516.1 FH 13..101 CDD:214627 46/87 (53%)
Foxj1NP_032266.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 77..110 1/2 (50%)
Forkhead 121..205 CDD:365978 46/83 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2114
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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