DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and Foxn1

DIOPT Version :10

Sequence 1:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_006532328.1 Gene:Foxn1 / 15218 MGIID:102949 Length:704 Species:Mus musculus


Alignment Length:411 Identity:107/411 - (26%)
Similarity:152/411 - (36%) Gaps:108/411 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PSRESYGEQ----KPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHN 64
            |...:.|.|    ||.|||..|..||:.:|....||:|:||.|:|:.|||::.....|:||:|||
Mouse   314 PQANAEGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHN 378

  Fly    65 LSFNDCFIKVPRRPDRPG-KGAYWALHPQAFDMFENGSLLRRRKRFKLHKNDKDLL--------N 120
            ||.|.||.||..:..... ||..|||:|...|..:..  |::.||       ||.:        .
Mouse   379 LSLNKCFEKVENKSGSSSRKGCLWALNPSKIDKMQEE--LQKWKR-------KDPIAVRKSMAKP 434

  Fly   121 EELTALANLNRFFFTTRNGGS------------AAHMSPLDMNNAAAMRLDPLPRSTAHMPNS-- 171
            |||.:|....|     ...||            ...:.|:..:...:..|.|:..:...||..  
Mouse   435 EELDSLIGDKR-----EKLGSPLLGCPPPGLAGPGPIRPMAPSAGLSQPLHPMHPAPGPMPGKNP 494

  Fly   172 ----LGPGVP------LPHVMPA-SMSGAD---------HTNL-ADMGL---TNLPALTSSEIEG 212
                ||...|      .||:.|: :.||..         |..| |..|.   :.|||.|......
Mouse   495 LQDLLGGHAPSCYGQTYPHLSPSLAPSGHQQPLFPQPDGHLELQAQPGTPQDSPLPAHTPPSHGA 559

  Fly   213 PLSLRPKRSFTIESLITPD-------KPEHPSEDEDD---------EDDRVDID---VVECSGIS 258
            .|...|..:.|:...:.||       ...:||..:.|         :||.:.:|   :|..|..|
Mouse   560 KLMAEPSSARTMHDTLLPDGDLGTDLDAINPSLTDFDFQGNLWEQLKDDSLALDPLVLVTSSPTS 624

  Fly   259 R-----------YPTTPAASEEYMSASRSSRTEDPLPPMHTINAGA----HVPFLHYATGANVAG 308
            .           :|..|..:|....|..       |.|..:..:||    |:..| |:....:..
Mouse   625 SSMLPPPPAAHCFPPGPCLAETGNEAGE-------LAPPGSGGSGALGDMHLSTL-YSAFVELES 681

  Fly   309 LPASGIPNSPTTYELAISHPL 329
            .|:|... .|..|....|.||
Mouse   682 TPSSAAA-GPAVYLSPGSKPL 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 45/110 (41%)
Foxn1XP_006532328.1 FH_FOXN1 326..422 CDD:410830 42/104 (40%)

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