DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd96Ca and Foxc2

DIOPT Version :9

Sequence 1:NP_001287516.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_038547.2 Gene:Foxc2 / 14234 MGIID:1347481 Length:494 Species:Mus musculus


Alignment Length:334 Identity:114/334 - (34%)
Similarity:155/334 - (46%) Gaps:52/334 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVPRR 77
            |||||||:|..|||.::|||.:.|:.||:||.||||:||:|.|.||||:|||||.|:||:||||.
Mouse    71 KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRD 135

  Fly    78 PDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKNDKDLLNEELTALANLNRFFFTTRNG--- 139
            ..:||||:||.|.|.:::||||||.||||:|||.....||  .||   .|:|.....||..|   
Mouse   136 DKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKD--KEE---RAHLKEPPSTTAKGAPT 195

  Fly   140 GSAAHMSPLDMNNAAAMR----------------------LDPLPRSTAHMPNSLGPGVPLPHVM 182
            |:.....|.:......::                      |...|||.:..|.. .|...||...
Mouse   196 GTPVADGPKEAEKKVVVKSEAASPALPVITKVETLSPEGALQASPRSASSTPAG-SPDGSLPEHH 259

  Fly   183 PASMSGADHTNLADMGLTNLPALTSSEIEGPLSLRPKRS-FTIESLITPDKPEHPSEDEDDEDDR 246
            .|:.:|     |....:..:..|.:|...|.||....|: ..:..|..|.....|:     ...:
Mouse   260 AAAPNG-----LPGFSVETIMTLRTSPPGGDLSPAAARAGLVVPPLALPYAAAPPA-----AYTQ 314

  Fly   247 VDIDVVECSGISRYPTTPAASEEYMSASRSSRTEDPLPPM-------HTINAGAHVPFLHYATGA 304
            .....:|.:|.:.|..:..|...|..|.|.:..  .:||.       |....|:.:..|:.|.|.
Mouse   315 PCAQGLEAAGSAGYQCSMRAMSLYTGAERPAHV--CVPPALDEALSDHPSGPGSPLGALNLAAGQ 377

  Fly   305 NVAGLPASG 313
            ..| |.|||
Mouse   378 EGA-LGASG 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd96CaNP_001287516.1 FH 13..101 CDD:214627 55/87 (63%)
Foxc2NP_038547.2 FH 71..159 CDD:214627 55/87 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..213 14/51 (27%)
EBP50_C 167..>257 CDD:286142 20/95 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..267 10/39 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..422 4/5 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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