DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AFDN and SEC3

DIOPT Version :9

Sequence 1:XP_016866367.1 Gene:AFDN / 4301 HGNCID:7137 Length:1832 Species:Homo sapiens
Sequence 2:NP_010924.1 Gene:SEC3 / 856726 SGDID:S000000810 Length:1336 Species:Saccharomyces cerevisiae


Alignment Length:726 Identity:151/726 - (20%)
Similarity:251/726 - (34%) Gaps:234/726 - (32%)


- Green bases have known domain annotations that are detailed below.


Human  1151 SPQLPWAEYSEPKKLPGDD-------RLMKNRADHRSSPNV------ANQPPSPGGKSAYASGTT 1202
            |.:.|:...|..::...|:       |.:...:.|.|. ||      ::.||..||..::....:
Yeast     3 SSKSPFKRKSHSRETSHDENTSFFHKRTISGSSAHHSR-NVSQGAVPSSAPPVSGGNYSHKRNVS 66

Human  1203 AKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTRE-------YFTFPASKSQDRMAPPQN----- 1255
            ....|..|.|...|:                |.|:       .|:.|..|:.:   ||.|     
Yeast    67 RASNSSQTSNFLAEQ----------------YERDRKAIINCCFSRPDHKTGE---PPNNYITHV 112

Human  1256 ------QWPNYEEKPHMHTDSNHSSIAIQRVTRSQEELREDKAYQLERHRIEAAMDRKSDSDMWI 1314
                  ::|:....|....::....:.|.....:..:|     .|:.:.|      ..||....|
Yeast   113 RIIEDSKFPSSRPPPDSKLENKKKRLLILSAKPNNAKL-----IQIHKAR------ENSDGSFQI 166

Human  1315 NQSSSLDSSTSSQEHLNHSSKSVTPASTLTKSGPGRWKTPAAIPATPVAVSQPIRTDLPPPPPPP 1379
            .::..|......::.|     .::....||.|....|:|.:|...| |.:...|..         
Yeast   167 GRTWQLTELVRVEKDL-----EISEGFILTMSKKYYWETNSAKERT-VFIKSLITL--------- 216

Human  1380 PVHYAGDFDG-----MSMDLPLPPPPSANQIGLPSAQVAAAERRKREEHQRWYEKEKARLEEERE 1439
               |...|:|     ::.||.|                             :|       .:||.
Yeast   217 ---YIQTFEGHVPELVNWDLSL-----------------------------FY-------LDERS 242

Human  1440 RKRREQERKLGQM-------------RTQSLNPAPFSPLTAQQMKPEKPSTLQRPQETVIRELQP 1491
            .:|.....:.|.:             .|||:...|||..|.:..:.|..|            :.|
Yeast   243 YQRAVITNRPGSVSPIKSPTSNFTTNTTQSVGSVPFSAPTERTRRSETES------------VNP 295

Human  1492 QQQPRTIERRDLQYITVSKEELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQSKPD 1556
            ...|.::|.. ....:::|...||..:|:    :.:.:.:||:|||                   
Yeast   296 VSTPASVEYH-AGMKSLNKAPYSSNSTLN----EVNKRYELEQQQQ------------------- 336

Human  1557 RSAEESDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARLQDEERRRQ 1621
               :|...||:|    :.|||||..|:.:                |:|||.||  |::.|||:||
Yeast   337 ---QEEAELRRL----EEQKRLQLQKENE----------------MKRLEEER--RIKQEERKRQ 376

Human  1622 QQLEEMRKREAEDRARQEE-ERRRQEEERTKRDAEEKRRQEEGYYSRLEAERRRQHDEAARRLLE 1685
            .:||..|:.|.|:|.||.| |.::|.|.:.:|..||::|.:: ....||.:|:::..|.|.||.:
Yeast   377 MELEHQRQLEEEERKRQMELEAKKQMELKRQRQFEEEQRLKK-ERELLEIQRKQREQETAERLKK 440

Human  1686 PEAPGLCRPPLPRDYEPPSPSPAPGAPPPPPQR----NASYLKTQVLS--PDSLFTAKFVAYNEE 1744
            .|...|.:    ::.|..|            :|    |.||  ||.::  .|:|.........||
Yeast   441 EEQEALAK----KEEEEKS------------KRNKVDNESY--TQEINGKVDNLLEDLNAVLAEE 487

Human  1745 EEEEDCSLAGPNSYPGSTGAAVGAHDACRDAKEKRSKSQDADSPGSSGAPENLTFKER------Q 1803
            .|.......|......||..   |||..:    |.......:|.|.|...::::..:.      .
Yeast   488 TETTPTMQNGTYVPERSTAR---AHDQLK----KPLNIAKVESLGGSDLNDSISLSDEIAGLNTS 545

Human  1804 RLFSQGQDVSN 1814
            .|..:.||..|
Yeast   546 NLSGEDQDEKN 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AFDNXP_016866367.1 None
SEC3NP_010924.1 PH_Sec3 82..232 CDD:270125 31/181 (17%)
PTZ00121 <283..478 CDD:173412 71/274 (26%)
SMC_N <348..629 CDD:308206 70/253 (28%)
ARGLU <358..444 CDD:405931 36/104 (35%)
Sec3_C 640..1316 CDD:418729
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2286
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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