Protein Alignment CG11920 and Rpf1

DIOPT Version :10

• Sequence 1: NP_651335.2
• Gene: CG11920 / 43009
• FlyBaseID: FBgn0039274
• Length: 298
• Species: Drosophila melanogaster
• Sequence 2: NP_001094264.1
• Gene: Rpf1 / 499725
• RGDID: 1559755
• Length: 349
• Species: Rattus norvegicus
• Alignment Length: 298
• Identity: 95/298 - (31%)
• Similarity: 157/298 - (52%)
• Gaps: 33/298 - (11%)

  Fly     7 RQRREYLYNK----ALTERLKSKQKIQETVVKSINENKAIGSKNVKKSL--TAYKSLKYADEGVD 65
            :|||..::.:    ...|:|.:|:|::       .|.:|:|.|...|.:  |......|.:..||
  Rat    60 KQRRHLMFTRWKQQQRKEKLAAKKKLK-------REREALGDKAPPKPVPKTIDNQRVYDETTVD 117

  Fly    66 DRTVNDE---YHYAGCE---------DPKIMLTTSHNPSSRLKMFMKELRLIIPNAQQMNRGNYQ 118
            .   |||   |..|..|         .|||::|||..|..|.....::|..:||::....|....
  Rat   118 P---NDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSHVYYRRGLA 179

  Fly   119 LTTLMHACRANNVTDFLIVHEHRGIPDSLVVCHLPYGPTAFFNISDVVMRHDIPDIG-HMSEQKP 182
            |..::..|.|.:.||.::::|.|..|:.|::.|||.||||.|.:|.|.:|.:|...| ..:|..|
  Rat   180 LKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPTEHVP 244

  Fly   183 HLIFNNFKTPIGLRTVKILKHLFP-VPKENSQRVMSFLNHNDSIIFRHHQYKYVN-KELELTEVG 245
            .:|.|||.|.:|....::...||| .|:...::|.:|.|..|.|.||.|:|.:.: |::.:.|:|
  Rat   245 EIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFKSEKKVGIQELG 309

  Fly   246 PRFSLKLYQIKLGTLENIKAADTEWINRP-YMNTSQKR 282
            |||:|||..::.||.:: |..:.||:::| .|:||:::
  Rat   310 PRFTLKLRSLQKGTFDS-KYGEYEWVHKPREMDTSRRK 346

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11920	NP_651335.2	Brix	84..250	CDD:214879	58/168 (35%)
Rpf1	NP_001094264.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..57
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	70..105		9/41 (22%)
		Brix	145..314	CDD:214879	58/168 (35%)
		RNA-binding. /evidence=ECO:0000250	303..320		8/16 (50%)