Protein Alignment shams and CG3253

DIOPT Version :9

• Sequence 1: NP_001097911.1
• Gene: shams / 43008
• FlyBaseID: FBgn0039273
• Length: 362
• Species: Drosophila melanogaster
• Sequence 2: NP_001246488.1
• Gene: CG3253 / 37861
• FlyBaseID: FBgn0041706
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 242
• Identity: 48/242 - (19%)
• Similarity: 73/242 - (30%)
• Gaps: 72/242 - (29%)

  Fly   115 LKFPSGNEVEW-----------RNLF-KPCAAQRLFLPSLLTHVDSLLYVDTDIL-FLSPISDIW 166
            |||.|...::|           |||. |.|..:.:||            .|.||: ..:.:..:.
  Fly   150 LKFRSLKTLQWRQRNTYPQNHMRNLARKGCQTKYVFL------------TDIDIVPSTNSVPQLN 202

  Fly   167 RFFKKFN------------ETQMSALTPEHENENIGWYNRFARHPFYGRLGVNSGVMLMNLTRMR 219
            .||:..|            |..:.|..|..:|..:....:....||:.:      |.:.|.....
  Fly   203 HFFRTANCTKSCAYVIPTFEIDVRATFPRSKNALVRLIRKGLARPFHEK------VFIYNQYATN 261

  Fly   220 EMKW------EQHIVSIHKEYKLRIIWGDQDIINILFYYHPDKLYIMPCEYNYRPDHCMYMSICN 278
            ..||      |..:...|.            :.|..|.|.|  .||.........:..:......
  Fly   262 FSKWLSPNTNETEVSVSHV------------VTNFEFLYEP--FYIAVDNAPAHDERFLGYGFTR 312

  Fly   279 MSQTGVKVIHGNRGYFHSDRQPLFKSIYGAMENY------QLGSNAN 319
            .||.....|.|.:.|..|   |:|...:|.....      :..:|||
  Fly   313 NSQVYEMHIAGYQFYVLS---PVFTGHWGLQRKQARPAWREQQNNAN 356

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
shams	NP_001097911.1	Glyco_tranf_GTA_type	48..343	CDD:299700	48/242 (20%)
		RfaJ	64..>270	CDD:224359	36/185 (19%)
CG3253	NP_001246488.1	Glyco_transf_49	52..371	CDD:290607	48/242 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3765
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900