DRSC/TRiP Functional Genomics Resources

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Protein Alignment shams and Xxylt

DIOPT Version :10

Sequence 1:NP_001097911.1 Gene:shams / 43008 FlyBaseID:FBgn0039273 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_611871.2 Gene:Xxylt / 37833 FlyBaseID:FBgn0034959 Length:458 Species:Drosophila melanogaster


Alignment Length:400 Identity:85/400 - (21%)
Similarity:143/400 - (35%) Gaps:135/400 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LHMCLLCLIALA---------ILSYFVHQRPSWVTENKGKMLGYNELQTGKPPL--------YIV 51
            :.:|:..||..|         |||.|:..|.:..:..:.:...|.::....|.:        |::
  Fly    74 IFICVCVLIVFANTHLLVRGNILSAFLSSRLNKHSHAEKQEARYPDIPATTPSVPPVLRPTHYLL 138

  Fly    52 VVSCGQRVQETLVMIKSAILFNYDEEYLKFVIFTEDG-----KGDEFREKL-------------T 98
            ..|..|       :..|:.|.....:|..|||:|.:.     |.|.|...|             |
  Fly   139 NYSSTQ-------LELSSHLNGLSSDYNIFVIYTRENYHLNLKFDLFAHSLLKHTSAQLHLHVIT 196

  Fly    99 D-----------WRDIKPF--TFDFEILPLKFPSGNEVEWRNLFKPCAAQ--------------- 135
            |           .|.|:.|  |..:.|..:|..|       ::.:..||:               
  Fly   197 DSESQPSVLEILQRQIRRFRRTVIYTIYDVKVCS-------SIIQDIAAKLSPYFSSTPNSYYSD 254

  Fly   136 RLFLPSLLTH------VDSLLYVDTDILFLSPISDIWRFFKKFNETQMSALTPE----------- 183
            .||..||..|      ::..:.:|.||:|.|.:..::..|..|...|:..|.||           
  Fly   255 SLFFLSLGLHRIADRSLNRAILLDCDIVFRSDVRLLFNEFDNFLPHQLYGLAPELTPVYRHILYR 319

  Fly   184 ----HENENIGWYNRFARHPFY---------------GRLGVNSGVMLMNLTRMREMK------W 223
                :...:.|       :|:|               |..|:||||:|:.|.|:|..|      .
  Fly   320 YRVRYPKTSFG-------NPYYPINNEGGNQHSRVHHGYPGLNSGVVLLLLNRIRNSKSYLEKLT 377

  Fly   224 EQHIVSIHKEYKLRIIWGDQDIINILFYYHPDKLYIMPCEYN-----YRPDHCMYMSICN---MS 280
            ...:.::..:|..:...||||...:|.|.:|:.:|.:.|.:|     :..|| .|..|.:   ..
  Fly   378 HSEVHTLVAKYSFKGHLGDQDFFTLLGYEYPNLIYRLDCIWNRQLCTWWKDH-GYSQIFDAYFRC 441

  Fly   281 QTGVKVIHGN 290
            :..:|:.|||
  Fly   442 EGNIKMYHGN 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shamsNP_001097911.1 Glyco_tranf_GTA_type 48..343 CDD:472172 73/346 (21%)
XxyltNP_611871.2 Glyco_tranf_GTA_type 172..>422 CDD:472172 56/263 (21%)

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