DRSC/TRiP Functional Genomics Resources

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Protein Alignment shams and CG9171

DIOPT Version :9

Sequence 1:NP_001097911.1 Gene:shams / 43008 FlyBaseID:FBgn0039273 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001162891.1 Gene:CG9171 / 33807 FlyBaseID:FBgn0031738 Length:544 Species:Drosophila melanogaster


Alignment Length:345 Identity:66/345 - (19%)
Similarity:115/345 - (33%) Gaps:116/345 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LQTGKPPLYIVVVSCGQRVQETLVMIKSAILFNYDEEYLKFVIFTEDGKGDEFREKLTDWRDIKP 105
            |:....|:.|.:.:.|...|.||..|:          ||              ||.|.....::.
  Fly   231 LERWNAPVSIAMHAPGTDFQPTLDSIR----------YL--------------RECLPGSHLVRA 271

  Fly   106 FT-----FDFEILPLKFPSGNE----------------VEWRNLFKPCAAQRLFLP--------- 140
            :|     |..:.:|...|..:|                |...:|:|  |.::|..|         
  Fly   272 YTTFHIYFGTKHIPKSVPKPHEVFKTGYNCTLPPPYFNVSSGHLYK--AQKKLLYPVNVGRNIAR 334

  Fly   141 -SLLTHV----DSLLYVDTDIL--FLSPISDIWRFFKK---------FNETQMSALTPEHENENI 189
             |.|||.    |..||.:..::  ||..|:...::.::         ..|.:.::..| |:...:
  Fly   335 DSALTHFILASDIELYPNPGLVKKFLEMIARNEQYLRRKAPRVFPLAIFEVEENSPVP-HDKTEL 398

  Fly   190 GWYNRFARH-PFYGRL-----GVNSGVMLMNLTRMREMK-------------WEQHIVSIHKE-- 233
            ..:.|..:. ||:.|:     ||......|:.....|:.             ||...:..|.:  
  Fly   399 QEFLRTGKAIPFHKRVCASCHGVPKSKEWMSANETDELSVFHIGKRTGYYVHWEPIYIGTHADPH 463

  Fly   234 YKLRIIW-GDQDIINILFYYHPDKLYIMPCEYNYRPDHCMYMSICNMSQTGVKVI-HGNRGYFHS 296
            |..|:.| |..|.:       |....:...:|.:   |.:..:.. :.:.|:||: ..||....|
  Fly   464 YDERLSWEGKSDKM-------PQGYALCVMDYEF---HILDNAFL-VHKPGIKVLKKDNRRAMLS 517

  Fly   297 DR---------QPLFKSIYG 307
            .:         .|..|.:||
  Fly   518 GKTNQLIRKIIYPELKIMYG 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shamsNP_001097911.1 Glyco_tranf_GTA_type 48..343 CDD:299700 64/338 (19%)
RfaJ 64..>270 CDD:224359 48/273 (18%)
CG9171NP_001162891.1 Glyco_transf_49 212..536 CDD:290607 64/342 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447383
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3765
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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