DRSC/TRiP Functional Genomics Resources

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Protein Alignment shams and Gxylt2

DIOPT Version :9

Sequence 1:NP_001097911.1 Gene:shams / 43008 FlyBaseID:FBgn0039273 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_941014.1 Gene:Gxylt2 / 232313 MGIID:2682940 Length:444 Species:Mus musculus


Alignment Length:331 Identity:158/331 - (47%)
Similarity:222/331 - (67%) Gaps:19/331 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 PP---LYIVVVSCGQRVQETLVMIKSAILFNYDEEYLKFVIFTEDGKGDEFREKLTDWRDIKPFT 107
            ||   :::.||:||.|::|||||:|||:||::.:  ::|.|||||....||.::|..|.|.....
Mouse   106 PPELWIHLAVVACGNRLEETLVMLKSAVLFSHRK--MRFHIFTEDALKPEFDKQLRQWPDSYTKK 168

  Fly   108 FDFEILPLKFPSGNEVEWRNLFKPCAAQRLFLPSLLTHVDSLLYVDTDILFLSPISDIWRFFKKF 172
            |:..:.|:.|..||..||:.|||||||||||||::|..||||||||||:|||.|:.|||:..::|
Mouse   169 FEHRLYPITFSVGNPQEWKKLFKPCAAQRLFLPAILKDVDSLLYVDTDVLFLRPVDDIWKLLRQF 233

  Fly   173 NETQMSALTPEHENENIGWYNRFARHPFYGRLGVNSGVMLMNLTRMRE-----------MKWEQH 226
            |.||::|:.||||...||||:|||||||||..|||||||||||||:|.           :.||:.
Mouse   234 NSTQLAAMAPEHEIPKIGWYSRFARHPFYGSAGVNSGVMLMNLTRIRNTQFKNSLIPAGLAWEEM 298

  Fly   227 IVSIHKEYKLRIIWGDQDIINILFYYHPDKLYIMPCEYNYRPDHCMYMSICNMSQ-TGVKVIHGN 290
            ::.::::||..|.|||||::||:|||:|:.||:.||::|||||||||.|.|..:: .||.|:|||
Mouse   299 LLPLYQKYKSAITWGDQDLLNIIFYYNPECLYVFPCQWNYRPDHCMYGSNCKEAEREGVSVLHGN 363

  Fly   291 RGYFHSDRQPLFKSIYGAMENYQLGSNANTEFLMPLHAALSIPSIKNSSCGKISNEVLKVANAVV 355
            ||.:|.|:||.|:::|.|:.::....|.......||.  |......::.||:|....||.....:
Mouse   364 RGVYHDDKQPTFRALYEAIRDFPFQDNLFQSMYYPLQ--LKFLETVHTLCGRIPQVFLKQIEKTM 426

  Fly   356 TKRYRE 361
            .:.|.:
Mouse   427 RRAYEK 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shamsNP_001097911.1 Glyco_tranf_GTA_type 48..343 CDD:299700 152/306 (50%)
RfaJ 64..>270 CDD:224359 116/216 (54%)
Gxylt2NP_941014.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..101
GT8_like_2 111..414 CDD:133052 152/306 (50%)
RfaJ 127..396 CDD:224359 139/270 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 283 1.000 Domainoid score I1641
eggNOG 1 0.900 - - E1_KOG3765
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H16823
Inparanoid 1 1.050 335 1.000 Inparanoid score I2392
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003370
OrthoInspector 1 1.000 - - otm43540
orthoMCL 1 0.900 - - OOG6_105081
Panther 1 1.100 - - O PTHR46012
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5350
SonicParanoid 1 1.000 - - X2261
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.850

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