DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11836 and Prss2l1

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_003749780.1 Gene:Prss2l1 / 683849 RGDID:1597830 Length:246 Species:Rattus norvegicus


Alignment Length:238 Identity:84/238 - (35%)
Similarity:130/238 - (54%) Gaps:16/238 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 NEEIRIVGGKPTGVNQYPWMARIVYDGKFHCGGSLLTKDYVLSAAHCVKKLRKSKIRVIFGDHDQ 156
            :::.:||||.....|..|:...: ..|...|||||:...:|:|||||.    ||:|:|..|:|:.
  Rat    19 DDDDKIVGGYTCQENSVPYQVSL-NSGYHFCGGSLINDQWVVSAAHCY----KSRIQVRLGEHNI 78

  Fly   157 EITSESQAIQRAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICLPRYNYDPAGRIGTV 221
            .:...::....| ..:|||.:||..|.||||.|::|..|:..:..:..:.||. :..|||....:
  Rat    79 NVLEGNEQFVNA-AKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPS-SCAPAGTQCLI 141

  Fly   222 VGWGRT-SEGGELPSIVNQVKVPIMSITECRNQRYKSTRITSSMLCAG--RPSMDSCQGDSGGPL 283
            .|||.| |.|...|.::..:..|::...:| ...|.. :||.:|:|||  ....||||||||||:
  Rat   142 SGWGNTLSFGVNEPDLLQCLDAPLLPQADC-EASYPG-KITDNMVCAGFLEGGKDSCQGDSGGPV 204

  Fly   284 LLSNGVKYFIVGIVSWGVGCGREGYPGVYSRVSKFIPWIKSNL 326
            :.:..::    ||||||.||.....||||::|..::.||:..:
  Rat   205 VCNGELQ----GIVSWGYGCALPDNPGVYTKVCNYVDWIEDTI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 84/230 (37%)
Prss2l1XP_003749780.1 Tryp_SPc 24..242 CDD:238113 84/230 (37%)

Return to query results.
Submit another query.