DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11836 and ela3l

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_021331840.2 Gene:ela3l / 554107 ZFINID:ZDB-GENE-060710-2 Length:270 Species:Danio rerio


Alignment Length:245 Identity:81/245 - (33%)
Similarity:127/245 - (51%) Gaps:28/245 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 RIVGGKPTGVNQYPWMARIVYDGK---FH-CGGSLLTKDYVLSAAHCVKKLRKSKIRVIFGDHDQ 156
            |:|.|:....:.:||...:.|...   :| ||||::.:::|::||||:...|  ..||:.|.||.
Zfish    28 RVVNGEEARPHSWPWQVSLQYQSGSSFYHTCGGSIIAENWVMTAAHCISSGR--NYRVLVGKHDL 90

  Fly   157 EITSE-SQAIQRAVTAVIKHKSFDP--DTYNNDIALLRLRKPISFSKIIKPICLPR------YNY 212
            .:..| ||.|  :...:|.|:.::.  ....|||||::|.:|::.|..|:..|:|.      .||
Zfish    91 SVNEEGSQTI--SAQKIIVHEKWNSMFVALGNDIALIKLAEPVTLSDTIQLGCVPAPGDVLPNNY 153

  Fly   213 DPAGRIGTVVGWGRTSEGGELPSIVNQVKVPIMSITECRNQRYKSTRITSSMLCAGRPS-MDSCQ 276
             |.    .:.||||.|.||.||..:.|..:|.:....|....:..:.:..:|:|||... :..|.
Zfish   154 -PC----YISGWGRLSTGGALPDKLQQALMPAVDHATCSRFDWWGSSVKETMVCAGGDGVVAGCN 213

  Fly   277 GDSGGPLLLSN--GVKYFIVGIVSW--GVGCGREGYPGVYSRVSKFIPWI 322
            |||||||...|  |: :.:.||.|:  |:||.....|.|::|||.|..|:
Zfish   214 GDSGGPLNCKNSDGI-WEVHGIASFVSGLGCNTIRKPTVFTRVSSFTDWV 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 80/244 (33%)
ela3lXP_021331840.2 None

Return to query results.
Submit another query.