DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11836 and Cfd

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001071110.1 Gene:Cfd / 54249 RGDID:2498 Length:263 Species:Rattus norvegicus


Alignment Length:234 Identity:78/234 - (33%)
Similarity:128/234 - (54%) Gaps:8/234 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 RIVGGKPTGVNQYPWMARIVYDGKFHCGGSLLTKDYVLSAAHCVKKLRKSK-IRVIFGDHDQEIT 159
            ||:||:....:..|:||.:..:|...|||:|:.:.:|||||||:..:.|.: ::|:.|.|... :
  Rat    25 RILGGQEAMAHARPYMASVQVNGTHVCGGTLVDEQWVLSAAHCMDGVTKDEVVQVLLGAHSLS-S 88

  Fly   160 SESQAIQRAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICLPRYNYD-PAGRIGTVVG 223
            .|.......|.:|:.|....||:..:|:.|.:|....|....::|:.|.|.:.: ..|.:..|.|
  Rat    89 PEPYKHLYDVQSVVLHPGSRPDSVEDDLMLFKLSHNASLGPHVRPLPLQREDREVKPGTLCDVAG 153

  Fly   224 WGRTSEGGELPSIVNQVKVPIMSITECRNQRYKSTRITSSMLCAGRPSMDSCQGDSGGPLLLSNG 288
            ||..:..|..|.::.|:.|.||....|..:.|....||.:|:||.....|:|:|||||||:..:.
  Rat   154 WGVVTHAGRRPDVLQQLTVSIMDRNTCNLRTYHDGAITKNMMCAESNRRDTCRGDSGGPLVCGDA 218

  Fly   289 VKYFIVGIVSWGVG-CGREGYPGVYSRVSKFIPWIKSNL 326
            |:    .:|:||.. ||....|||::||:.::|||::.|
  Rat   219 VE----AVVTWGSRVCGNRRKPGVFTRVATYVPWIENVL 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 76/230 (33%)
CfdNP_001071110.1 Tryp_SPc 26..252 CDD:238113 76/230 (33%)
Self-inhibitor loop. /evidence=ECO:0000250|UniProtKB:P00746 224..228 2/3 (67%)

Return to query results.
Submit another query.