DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11836 and grass

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:283 Identity:94/283 - (33%)
Similarity:146/283 - (51%) Gaps:37/283 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 SSLKNCDCDCG-FSNEEIRIVGGKPTGVNQYPWMARIVY----DGKFHCGGSLLTKDYVLSAAHC 138
            |..|:.:.||| |.::  |:..|....::..||||.:.|    :.:|.|||:::::.|:|:||||
  Fly   102 SLFKDENFDCGNFLSQ--RVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHC 164

  Fly   139 VKKLRKSKIRVIFGDHDQEITSESQAIQR-------------AVTAVIKHKSFDPDTYNNDIALL 190
            |..|:.....:..|:|  .|::|....|:             .:...:.|:.:|.....:|||||
  Fly   165 VHGLQNDLYEIRLGEH--RISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALL 227

  Fly   191 RLRKPISFSKIIKPICLPRYN--YDPAGRIGT--VVGWGRTSEGGELPSIVNQVKVPIMSITECR 251
            :|.:.:.|.|.|||||||..:  .:.|.:|.|  |.||| |:|.|....::.|..||:...:.| 
  Fly   228 KLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWG-TTENGSSSDVLLQANVPLQPRSAC- 290

  Fly   252 NQRYKSTRITSSMLCAGRPSM-DSCQGDSGGPL------LLSNGVKYFIVGIVSWG-VGCGREGY 308
            :|.|:.. :..|.||.|...: |||:|||||||      |.....|....||||.| |.||:...
  Fly   291 SQAYRRA-VPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISL 354

  Fly   309 PGVYSRVSKFIPWIKSNLENTCL 331
            ||:|:.|.:::.||...:.:..|
  Fly   355 PGLYTNVGEYVQWITDTMASNGL 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 86/256 (34%)
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 86/254 (34%)
Blue background indicates that the domain is not in the aligned region.

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