DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11836 and CG1299

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster


Alignment Length:270 Identity:91/270 - (33%)
Similarity:149/270 - (55%) Gaps:30/270 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 KNCDCDCGFSNEEIRIVGGKPTGVNQYPWMARIVYD----GKFHCGGSLLTKDYVLSAAHCVKKL 142
            :.|....|:..   :||||:.:....:||:|.:.||    ..|.|||:|:|..:||:||||:   
  Fly   249 EGCGSTVGYFK---KIVGGEVSRKGAWPWIALLGYDDPSGSPFKCGGTLITARHVLTAAHCI--- 307

  Fly   143 RKSKIRVIFGDHDQEITSESQAIQRAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICL 207
            |:....|..|:||....:|:..:...:...:.|..::.....:|:|:|.|.:.:.|:..|.||||
  Fly   308 RQDLQFVRLGEHDLSTDTETGHVDINIARYVSHPDYNRRNGRSDMAILYLERNVEFTSKIAPICL 372

  Fly   208 P------RYNYDPAGRIGTVVGWGRTSEGGELPSIVNQVKVPIMSITEC-----RNQRYKST-RI 260
            |      :.:|  .|.:..|.|||:|.||||...::|::::||.....|     :.:||.|. :.
  Fly   373 PHTANLRQKSY--VGYMPFVAGWGKTMEGGESAQVLNELQIPIYDNKVCVQSYAKEKRYFSADQF 435

  Fly   261 TSSMLCAGRPS--MDSCQGDSGGPLLL----SNGVKYFIVGIVSWGVGCGREGYPGVYSRVSKFI 319
            ..::||||..|  .|:|||||||||:|    ...::::::|:||:|:||.|...|||||....|:
  Fly   436 DKAVLCAGVLSGGKDTCQGDSGGPLMLPEPYQGQLRFYLIGVVSYGIGCARPNVPGVYSSTQYFM 500

  Fly   320 PWIKSNLENT 329
            .||...:::|
  Fly   501 DWIIQQVQDT 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 88/249 (35%)
CG1299NP_647862.1 CLIP 37..92 CDD:463440
CLIP 164..216 CDD:463440
Tryp_SPc 261..503 CDD:238113 86/246 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.