DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11836 and CG4927

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001033953.1 Gene:CG4927 / 36852 FlyBaseID:FBgn0034139 Length:362 Species:Drosophila melanogaster


Alignment Length:288 Identity:87/288 - (30%)
Similarity:142/288 - (49%) Gaps:42/288 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 EYTENSSLKNCDCDCGFSNEEIR--------IVGGKPTGVNQYPWMARIVYDGK------FHCGG 124
            :::.|..|:..:.:|...| |||        ||||......::|:||.:...||      :.||.
  Fly    75 QFSANIGLRRFEKECRRFN-EIRTSCRTTPFIVGGAKAAGREFPFMALLGQRGKNSSQIDWDCGA 138

  Fly   125 SLLTKDYVLSAAHCVKKLRKSKIR-----------VIFGDHDQEITSESQAIQ--RAVTAVIKHK 176
            .::...:||:||||::.....:.|           |..|:.|...|::....|  |.:..|: |.
  Fly   139 IIIHPKFVLTAAHCLETSETKEQRLDPNYDGPKYVVRLGELDYNSTTDDAQPQDFRVLNYVV-HP 202

  Fly   177 SF--DPDT--YNNDIALLRLRKPISFSKIIKPICLPRYNYDPAGRIGTVVGWGRTSEGGELPSIV 237
            ::  |.||  ..||||::.|....:||:.:.|.|||....:...:: ...|||.|||.|...|.:
  Fly   203 AYGEDDDTGSRKNDIAVVELEMEATFSEYVAPACLPLDGGNEQLQV-AAAGWGATSESGHASSHL 266

  Fly   238 NQVKVPIMSITECRNQRYKSTRITSSMLCAG--RPSMDSCQGDSGGPLLLSNGVKYF----IVGI 296
            .:|.:....:.|| :||.:......:.||||  ..|.|:|.||||||:.:.:.: |.    ::||
  Fly   267 LKVSLDRYDVAEC-SQRLEHKIDVRTQLCAGSRSTSADTCYGDSGGPVFVQHPI-YSCLKQVIGI 329

  Fly   297 VSWGVGCGREGYPGVYSRVSKFIPWIKS 324
            .|:|:.||.:|.|.||::|..:..||::
  Fly   330 TSYGLVCGVQGLPSVYTKVHLYTDWIEN 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 80/257 (31%)
CG4927NP_001033953.1 Tryp_SPc 105..358 CDD:238113 80/257 (31%)

Return to query results.
Submit another query.