DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11836 and SPH93

DIOPT Version :9

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_609840.1 Gene:SPH93 / 35049 FlyBaseID:FBgn0032638 Length:494 Species:Drosophila melanogaster


Alignment Length:324 Identity:104/324 - (32%)
Similarity:154/324 - (47%) Gaps:50/324 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GFNESDAINTIHTGHNKRTSKFLFDTIFRISSGVSNAFGLSDTEDEVEYTENSSLKNCDCDCGFS 91
            |:..::..|..:.|.|..|:                 ||..........|...|.:.....||.|
  Fly   189 GYPTTNVGNPTNNGGNPTTN-----------------FGNPTNNGGNPTTNVGSSELLSPSCGMS 236

  Fly    92 N-------EEIRIVGGKPTGVNQYPWMARIVYDGKFHCGGSLLTKDYVLSAAHCVKKLRKSKIRV 149
            |       |.|.|...:|.   ||||...|.::|::..||||:..:.||:.||.|..: ::::.|
  Fly   237 NANGLQMVEGITIDQARPA---QYPWAVAIFHNGQYLAGGSLIQPNVVLTVAHRVITI-ETELVV 297

  Fly   150 IFGD----HDQEI-TSESQAIQRAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICLPR 209
            ..||    .|:|| .||.:.::|||.    |:.||..:..|::|||.|..|...:..|:.||||.
  Fly   298 RAGDWDLKSDREIFLSEQREVERAVI----HEGFDFKSGANNLALLFLNSPFKLNDHIRTICLPT 358

  Fly   210 YNYDPAGRIGTVVGWGRTS-EGGELPSIVNQVKVPIMSITECRNQRYKSTR------ITSSMLCA 267
            .|...|||..||.|||:.. |.....:::.:|::.:::...| .:..:|||      :..:::||
  Fly   359 PNKSFAGRRCTVAGWGKMRYEDQRYSTVLKKVQLLVVNRNVC-EKFLRSTRLGAKFELPKNIICA 422

  Fly   268 -GRPSMDSCQGDSGGPLLLS----NGVKYFIVGIVSWGVGCGREGYPGVYSRVSKFIPWIKSNL 326
             |....|:|.||.|..|..|    |...|...|||:||||||:||.|.:|:.||||..||...|
  Fly   423 GGELGRDTCTGDGGSALFCSIGGENSGVYEQAGIVNWGVGCGQEGIPAIYTEVSKFTNWITEKL 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 88/244 (36%)
SPH93NP_609840.1 GRP <136..189 CDD:254089 104/324 (32%)
Tryp_SPc 250..485 CDD:238113 87/243 (36%)
Tryp_SPc 252..482 CDD:214473 85/238 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457689
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24256
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.