DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11836 and CG40160

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster


Alignment Length:376 Identity:99/376 - (26%)
Similarity:152/376 - (40%) Gaps:101/376 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LFDTIFRISSGVSNAFGLSDTEDEVE-------YTENSSLKNCDCDC------------------ 88
            :|:|...:|:...:..||..|.|.:|       :|..|. |...|:|                  
  Fly    37 IFNTNSNLSAQKESGIGLVITPDPMETISQQSNFTSTSG-KTATCNCVPYYKCDPSTKSFTEDGS 100

  Fly    89 --GFS------NEE--------------------------------------IRIVGG------- 100
              ||.      |::                                      :|..||       
  Fly   101 FDGFGVIDIRFNDDDPICPASVDVCCDANRTLNKTLNPTPLDQRPNQPRGCGVRNTGGLDFTLSG 165

  Fly   101 ---KPTGVNQYPWMARIVYDG--KFHCGGSLLTKDYVLSAAHCVKKLRKSKIRVIFGDHDQEITS 160
               ...|..::||...:::.|  .:.|.|||:.|..||:|||||:.||.....|..|:.|.:...
  Fly   166 VSQNEAGFGEFPWTVALLHSGNLSYFCAGSLIHKQVVLTAAHCVESLRTGSFTVRAGEWDTQTMK 230

  Fly   161 ESQAIQ-RAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICLPRYNYDP-AGRIGTVVG 223
            |....| |:|..||.|..::..:...|.||:.|.:|::....|..||||:.:..| .|......|
  Fly   231 ERLPYQERSVQTVILHPDYNRRSIAYDFALVILSQPVTLDDHINVICLPQQDDIPQPGNTCFSTG 295

  Fly   224 WGRTSEG--GELPSIVNQVKVPIMSITECRNQRYKSTR------ITSSMLCA-GRPSMDSCQGDS 279
            ||:.:.|  |:..|::.:|.:||:....|:. |.:.||      :..|.:|| |:..:|:||||.
  Fly   296 WGKDAFGSLGKYSSLMKRVPLPIVEFNSCQT-RLRGTRLGPKFALDRSFICAGGQRGIDTCQGDG 359

  Fly   280 GGPLLLSNG----VKYFIVGIVSWGVGCGREGYPGVYSRVSKFIPWIKSNL 326
            |.||....|    .:|...|||:||:||..| .|..|:.|:....||...:
  Fly   360 GAPLACPRGSTRESRYQQTGIVAWGIGCNDE-VPAAYANVALVRGWIDQQM 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 82/254 (32%)
CG40160NP_001015212.1 CLIP_1 73..127 CDD:465709 7/54 (13%)
Tryp_SPc 166..408 CDD:238113 80/243 (33%)

Return to query results.
Submit another query.