DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11836 and Send1

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster


Alignment Length:239 Identity:79/239 - (33%)
Similarity:116/239 - (48%) Gaps:30/239 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 RIVGGKPTGVNQYPWMARIVYDGKFHCGGSLLTKDYVLSAAHCVKKLRKSKIRVIFGDHDQEITS 160
            ||:||....:...||...:.|.|:..||||:.:|..:::||||:|:..:| ||.....||     
  Fly    29 RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKEGERS-IRAGSSLHD----- 87

  Fly   161 ESQAIQRAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICLPRYNYDPAGRIGTVVGWG 225
             |..:...|.|.|.|..||.....||:|:|:|..|:|||..|:.|.|...: .|........|||
  Fly    88 -SGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETD-PPTSSSALATGWG 150

  Fly   226 RTSEGGEL--PSIVNQVKVPIMSITECRNQRYKSTRITSSMLCAGRPSMDSCQGDSGGPLLLSNG 288
            |   |..|  |..:..|::.|..:..|: .:| ...:.:..:||||.....|.|||||||:. ||
  Fly   151 R---GNFLIRPRQLQGVEILIRPLIVCK-LKY-GNGVFNEDICAGRMGKGGCYGDSGGPLVF-NG 209

  Fly   289 VKYFIVGIVSWGVGCGREGY-----PGVYSRVSKFIPWIKSNLE 327
            .   :|||.|      |.|.     ..:|:.|:::..||.|.::
  Fly   210 Q---LVGITS------RTGNIVCLGSSLYASVARYRNWILSAID 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 77/234 (33%)
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 76/232 (33%)

Return to query results.
Submit another query.