DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11836 and LOC3290018

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_556312.3 Gene:LOC3290018 / 3290018 VectorBaseID:AGAMI1_011462 Length:299 Species:Anopheles gambiae


Alignment Length:243 Identity:87/243 - (35%)
Similarity:129/243 - (53%) Gaps:17/243 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 RIVGGKPTGVNQYPWMARIVYD---GKFHCGGSLLTKDYVLSAAHCV----KKLRKSKIRVIFGD 153
            ||..|:.....|:|:...::.:   |...||||:||.:|:|:|||||    ..|..|. ..|.|.
Mosquito    54 RITNGQEATPGQFPYQIALLSNFATGTGLCGGSVLTNNYILTAAHCVISGATTLATSG-TAIMGA 117

  Fly   154 HDQEITSESQAIQRAVTAVIK-HKSFDPDTYNNDIALLRLRKPISFSKIIKPICLPRYNYDP--A 215
            |::.:...:|......:|.|: |..::|....||||::||..||:|:..|:||.||..:...  .
Mosquito   118 HNRNVNEPTQQRIGFTSAGIRAHPGYNPTNIRNDIAVVRLNSPITFTARIQPIRLPGRSDSRQFG 182

  Fly   216 GRIGTVVGWGRTSEGGELPSIVNQVKVPIMSITECRNQRYKSTRITSSMLC-AGRPSMDSCQGDS 279
            |..|||.|:|||:..|....:|.....|:|:..:| ..|:.:..|....:| :|.....||.|||
Mosquito   183 GFTGTVSGFGRTTNTGATSPVVMFTSNPVMTNADC-IARWNTALIQPQNVCLSGDGGRSSCNGDS 246

  Fly   280 GGPLLLSNGVKYFIVGIVSWG--VGCGREGYPGVYSRVSKFIPWIKSN 325
            ||||.:.:|.. ..:||||:|  .||. .|.|.||:|||.::.||.:|
Mosquito   247 GGPLTVQDGGS-LQIGIVSFGSAAGCS-IGMPSVYARVSFYLDWIDAN 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 85/240 (35%)
LOC3290018XP_556312.3 None

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