DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11836 and Tmprss6

DIOPT Version :9

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_006242057.1 Gene:Tmprss6 / 315388 RGDID:1307138 Length:811 Species:Rattus norvegicus


Alignment Length:383 Identity:108/383 - (28%)
Similarity:184/383 - (48%) Gaps:70/383 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LTANYSSVLSLE------YSKGFNES-------------------DAINTIHTGHNKR--TSKFL 49
            :|.|::|.:||.      |...:|:|                   |.|.....|.::|  ..:.:
  Rat   430 ITINFTSQISLTGPGVQVYYSLYNQSDPCPGEFLCSVNGLCVPACDGIKDCPNGLDERNCVCRAM 494

  Fly    50 FD--------TIFRISSGVSNAFGLSDTEDEVE------YT----ENSSLK----NCD------- 85
            |.        ::.|:.....:....||.|...|      :|    :.|.:|    .||       
  Rat   495 FQCQEDSTCISLPRVCDRQPDCLNGSDEEQCQEGVPCGTFTFQCEDRSCVKKPNPECDGQADCRD 559

  Fly    86 ------CDCGFSNEEIRIVGGKPTGVNQYPWMARIVYDGKFHCGGSLLTKDYVLSAAHCVKK--L 142
                  ||||......|||||..:...::||.|.:...|:..|||:|:...:|::||||.::  :
  Rat   560 GSDEEHCDCGLQGPSSRIVGGAMSSEGEWPWQASLQIRGRHICGGALIADRWVITAAHCFQEDSM 624

  Fly   143 RKSKIRVIFGDHDQEITSESQAIQRAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICL 207
            ...::..:|....::.:.....:...|:.:..|...:.|:::.|:|||:|..|:.:|..::|:||
  Rat   625 ASPRLWTVFLGKMRQNSRWPGEVSFKVSRLFLHPYHEEDSHDYDVALLQLDHPVVYSATVRPVCL 689

  Fly   208 P-RYNYDPAGRIGTVVGWGRTSEGGELPSIVNQVKVPIMSITECRNQRYKSTRITSSMLCAG--R 269
            | |.::...|:...:.|||...|||...|.:.:|.|.::....| |:.|: .::|..|||||  :
  Rat   690 PARSHFFEPGQHCWITGWGAQREGGPGSSTLQKVDVQLIPQDLC-NEAYR-YQVTPRMLCAGYRK 752

  Fly   270 PSMDSCQGDSGGPLLLSN-GVKYFIVGIVSWGVGCGREGYPGVYSRVSKFIPWIKSNL 326
            ...|:|||||||||:... ..::|:.|:||||:||||..:.|||:||::.:.||:..|
  Rat   753 GKKDACQGDSGGPLVCKEPSGRWFLAGLVSWGLGCGRPNFFGVYTRVTRVVNWIQQVL 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 79/233 (34%)
Tmprss6XP_006242057.1 SEA 88..185 CDD:279699
LDLa 459..489 CDD:238060 4/29 (14%)
LDLa 495..525 CDD:238060 5/29 (17%)
Ldl_recept_a 529..566 CDD:278486 5/36 (14%)
Tryp_SPc 576..806 CDD:214473 78/231 (34%)
Tryp_SPc 577..809 CDD:238113 79/233 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100031
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X11
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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