DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11836 and Tmprss3

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:252 Identity:92/252 - (36%)
Similarity:140/252 - (55%) Gaps:17/252 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 CDCDCGFSNEEIRIVGGKPTGVNQYPWMARIVYDGKFHCGGSLLTKDYVLSAAHCVKKLRKSK-- 146
            |....|:|.   |||||..:.:.|:||...:.:.|...||||::|..::::|||||..|...|  
  Rat   207 CGMRTGYSP---RIVGGNVSSLTQWPWQVSLQFQGYHLCGGSVITPLWIVTAAHCVYDLYHPKSW 268

  Fly   147 -IRV-IFGDHDQEITSESQAIQRAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICLPR 209
             ::| :....|..:.|      ..|..:|.|..:.|....|||||::|.:|::|.:.|:|||||.
  Rat   269 TVQVGLVSLMDSPVPS------HLVEKIIYHSKYKPKRLGNDIALMKLSEPLTFDETIQPICLPN 327

  Fly   210 YNYD-PAGRIGTVVGWGRTSEG-GELPSIVNQVKVPIMSITECRNQRYKSTRITSSMLCAG--RP 270
            ...: |.|::....|||.|.:| |:...::|...||::|...|.::......|:.||||||  :.
  Rat   328 SEENFPDGKLCWTSGWGATEDGAGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLKG 392

  Fly   271 SMDSCQGDSGGPLLLSNGVKYFIVGIVSWGVGCGREGYPGVYSRVSKFIPWIKSNLE 327
            .:|||||||||||:......:.:||..|:|:||.....||||:|::.|:.||...||
  Rat   393 GVDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHEQLE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 86/235 (37%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060
SRCR_2 112..211 CDD:464747 1/3 (33%)
Tryp_SPc 216..444 CDD:214473 85/233 (36%)
Blue background indicates that the domain is not in the aligned region.

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