DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11836 and Habp2

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001001505.2 Gene:Habp2 / 292126 RGDID:1302979 Length:558 Species:Rattus norvegicus


Alignment Length:250 Identity:91/250 - (36%)
Similarity:138/250 - (55%) Gaps:27/250 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 RIVGGKPTGVNQYPWMARI---------VYDGKFHCGGSLLTKDYVLSAAHCVKKLRKSKIRVIF 151
            ||.||..:...::||...:         :..|.| |||||:...:||:||||.....| .::|:.
  Rat   311 RIYGGFKSTAGKHPWQVSLQTSLPLTTSMPQGHF-CGGSLIHPCWVLTAAHCTDMSTK-HLKVVL 373

  Fly   152 GDHDQEITSESQAIQRAVTAVIKHKSFD--PDTYNNDIALLRLRKPIS-----FSKIIKPICLPR 209
            ||.|.:.|...:...| |..::|:..::  .:..:||||||:| ||:.     .||.:|.:|||.
  Rat   374 GDQDLKKTESHEQTFR-VEKILKYSQYNERDEIPHNDIALLKL-KPVGGHCALESKYVKTVCLPS 436

  Fly   210 YNYDPAGRIGTVVGWGRTSEGGELPSIVNQVKVPIMSITECRNQRYKSTRITSSMLCAG---RPS 271
            ..: |:|....:.|||.| |.||....:...||.:::...|.:::.....|..||:|||   :|.
  Rat   437 DPF-PSGTECHISGWGVT-ETGEGSRQLLDAKVKLIANALCNSRQLYDHTIDDSMICAGNLQKPG 499

  Fly   272 MDSCQGDSGGPLLLSNGVKYFIVGIVSWGVGCGREGYPGVYSRVSKFIPWIKSNL 326
            .|:|||||||||.......|::.||||||..||::  ||||::|:||:.|||:.:
  Rat   500 SDTCQGDSGGPLTCEKDGTYYVYGIVSWGQECGKK--PGVYTQVTKFLNWIKTTM 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 90/246 (37%)
Habp2NP_001001505.2 EGF_CA 71..107 CDD:238011
KR 191..275 CDD:238056
Tryp_SPc 312..551 CDD:238113 90/246 (37%)
Blue background indicates that the domain is not in the aligned region.

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