DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11836 and Ctrb1

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_036668.2 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:237 Identity:88/237 - (37%)
Similarity:132/237 - (55%) Gaps:13/237 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 RIVGGKPTGVNQYPWMARIVYDGKFH-CGGSLLTKDYVLSAAHCVKKLRKSKIRVIFGDHDQEIT 159
            |||.|:......:||...:.....|| |||||:::|:|::||||  .::.|.: |:.|:.||...
  Rat    33 RIVNGEDAIPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHC--GVKTSDV-VVAGEFDQGSD 94

  Fly   160 SESQAIQRAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICLPRYNYD-PAGRIGTVVG 223
            .|:..:.: :..|.|:..|:..|..|||.||:|..|..||:.:..:|||..:.| |.|.:....|
  Rat    95 EENIQVLK-IAQVFKNPKFNMFTVRNDITLLKLATPAQFSETVSAVCLPNVDDDFPPGTVCATTG 158

  Fly   224 WGRTSEGG-ELPSIVNQVKVPIMSITECRNQRYKS--TRITSSMLCAGRPSMDSCQGDSGGPLLL 285
            ||:|.... :.|..:.|..:||:|..:|:    ||  ::||..|:|||...:.||.|||||||:.
  Rat   159 WGKTKYNALKTPEKLQQAALPIVSEADCK----KSWGSKITDVMICAGASGVSSCMGDSGGPLVC 219

  Fly   286 SNGVKYFIVGIVSWGVGCGREGYPGVYSRVSKFIPWIKSNLE 327
            .....:.:.||||||.|......|.|||||:..:||::..||
  Rat   220 QKDGVWTLAGIVSWGSGVCSTSTPAVYSRVTALMPWVQQILE 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 85/232 (37%)
Ctrb1NP_036668.2 Tryp_SPc 34..259 CDD:238113 85/232 (37%)

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