DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11836 and Tmprss2

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:313 Identity:97/313 - (30%)
Similarity:154/313 - (49%) Gaps:67/313 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GVSNAF----GLSDTEDEVEYTE-NSSLKNCD--------------------C-DCGFSN--EEI 95
            |..|:|    |:.|......:.: |.|..|.|                    | :||..:  .:.
  Rat   188 GYKNSFYSSQGIPDQSGATSFMKLNVSAGNVDLYKKLYHSDSCSSRMVVSLRCIECGVRSVRRQS 252

  Fly    96 RIVGGKPTGVNQYPWMARIVYDGKFHCGGSLLTKDYVLSAAHCVKK--------------LRKSK 146
            |||||.......:||...:...|...||||::|.:::::|||||::              |::| 
  Rat   253 RIVGGSTASPGDWPWQVSLHVQGIHVCGGSIITPEWIVTAAHCVEEPLSSPRYWTAFAGILKQS- 316

  Fly   147 IRVIFGDHDQEITSESQAIQRAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICLPRYN 211
             .:.:|...|            |..||.|.::|..|.||||||::|:.|::|:.::||:|||   
  Rat   317 -LMFYGSRHQ------------VEKVISHPNYDSKTKNNDIALMKLQTPLAFNDVVKPVCLP--- 365

  Fly   212 YDPAGRIGT-----VVGWGRTSEGGELPSIVNQVKVPIMSITECRNQRYKSTRITSSMLCAG--R 269
             :|...:..     :.|||.|.|.|:...::|...||::..::|.::...:..||.:|:|||  :
  Rat   366 -NPGMMLDLAQECWISGWGATYEKGKTSDVLNAAMVPLIEPSKCNSKYIYNNLITPAMICAGFLQ 429

  Fly   270 PSMDSCQGDSGGPLLLSNGVKYFIVGIVSWGVGCGREGYPGVYSRVSKFIPWI 322
            .|:|||||||||||:......::::|..|||.||.:...||||..|:.|..||
  Rat   430 GSVDSCQGDSGGPLVTLKNEIWWLIGDTSWGSGCAKAYRPGVYGNVTVFTDWI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 84/247 (34%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747 12/58 (21%)
Tryp_SPc 254..485 CDD:238113 84/247 (34%)
Blue background indicates that the domain is not in the aligned region.

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