DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11836 and hgf

DIOPT Version :10

Sequence 1:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster
Sequence 2:XP_002933142.2 Gene:hgf / 100495840 XenbaseID:XB-GENE-999992 Length:710 Species:Xenopus tropicalis


Alignment Length:281 Identity:65/281 - (23%)
Similarity:117/281 - (41%) Gaps:45/281 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 TEDEVEYTENSSLKNCDCD-------------CGFSNEEIRIVGGKPTGVNQYPWMARIVYDGKF 120
            |:|.....:...:..|:.|             |. |::::|:|.|.||...:. ||..:.|....
 Frog   438 TDDPFVPWDYCHISRCEGDTTKIMANIDSPITCS-SSKQLRVVNGIPTQTRKV-WMVSVRYRNSH 500

  Fly   121 HCGGSLLTKDYVLSAAHCVKKLRKSKIRVIFGDHDQEITSESQAIQRAVTAVIKHKS-------- 177
            .|||:|:.:::||:|..|          .:.||:|.:.......:....:...|||.        
 Frog   501 KCGGTLIKENWVLTARQC----------FLSGDNDLKDYEAWLGVHNIYSTTEKHKQVLNISQLV 555

  Fly   178 FDPDTYNNDIALLRLRKPISFSKIIKPICLPRYNYD-PAGRIGTVVGWGRTSEG---GELPSIVN 238
            ..|.  .:::.||:|.:|.:.:..:..|.||.|... |...:.:|.|||.|...   |:|    .
 Frog   556 HGPK--GSNLVLLKLSRPATLNAYVDRIKLPNYGCTIPENTMCSVYGWGHTGTNDYDGQL----Q 614

  Fly   239 QVKVPIMSITECRNQRYKSTRITSSMLCA--GRPSMDSCQGDSGGPLLLSNGVKYFIVGIVSWGV 301
            :..:.|:...:|.........:..|.:||  ...::..|:.|.||||:......:.:.|::..|.
 Frog   615 EGTLHIVGNEKCNEHHKGKITVNESEICAMSETANIGPCERDYGGPLICEENRTHLVQGVIIPGR 679

  Fly   302 GCGREGYPGVYSRVSKFIPWI 322
            ||..:..|.::.||:.:..||
 Frog   680 GCAIQKRPVIFVRVAYYAKWI 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 58/240 (24%)
hgfXP_002933142.2 PAN_AP_HGF 26..109 CDD:238532
KR 113..195 CDD:214527
KR 197..275 CDD:214527
KR 288..367 CDD:214527
KR 373..454 CDD:238056 2/15 (13%)
Tryp_SPc 478..703 CDD:238113 58/240 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.