DRSC/TRiP Functional Genomics Resources

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Protein Alignment veli and Pdzd11

DIOPT Version :10

Sequence 1:NP_733076.2 Gene:veli / 43003 FlyBaseID:FBgn0039269 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_082579.1 Gene:Pdzd11 / 72621 MGIID:1919871 Length:140 Species:Mus musculus


Alignment Length:39 Identity:14/39 - (35%)
Similarity:19/39 - (48%) Gaps:5/39 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 GRNGVSHVVKQILTPEETKKL----QASATLMAQVQSGI 330
            |.|.:|. .|.:|.|..:.||    :|.|...||:.|.|
Mouse   231 GHNSLSR-PKSLLVPSPSTKLLTLEEAQARTQAQINSPI 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veliNP_733076.2 L27 14..66 CDD:460717
PDZ_Lin-7-like 90..226 CDD:467258
Pdzd11NP_082579.1 PDZ_PDZD11-like 46..128 CDD:467234
Blue background indicates that the domain is not in the aligned region.

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