Protein Alignment veli and Lin7c

DIOPT Version :10

• Sequence 1: NP_733076.2
• Gene: veli / 43003
• FlyBaseID: FBgn0039269
• Length: 246
• Species: Drosophila melanogaster
• Sequence 2: NP_068623.1
• Gene: Lin7c / 60442
• RGDID: 621164
• Length: 197
• Species: Rattus norvegicus
• Alignment Length: 246
• Identity: 156/246 - (63%)
• Similarity: 172/246 - (69%)
• Gaps: 51/246 - (20%)

  Fly     1 MADNAEPLTLSRDVKRSIELLEKLQASGDFPTTKLAALQKVLNSDFMTSVREVYEHVYETVDIQG 65
            ||...||:.|.||:.|:||||||||.||:.|..||.|||:||.|:|..:||||||||||||||..
  Rat     1 MAALGEPVRLERDICRAIELLEKLQRSGEVPPQKLQALQRVLQSEFCNAVREVYEHVYETVDISS 65

  Fly    66 SHDVRASATAKATVAAFAASEGHAHPRVVELPKTEEGKTRPYELRIEGIPLYHKTNTLIVKVYRP 130
            |.:|||:||||||||||||||||:||||||||||||
  Rat    66 SPEVRANATAKATVAAFAASEGHSHPRVVELPKTEE----------------------------- 101

  Fly   131 RIYVSIIHLIWKALSIFNFCFSGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVN 195
                                  |||||:|||||||||||||||||||:|||||||||||||||||
  Rat   102 ----------------------GLGFNIMGGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVN 144

  Fly   196 GVSVEGENHEKAVELLKQAVGSVKLVVRYTPKVLEEMEMRFDKQRNTRRRQ 246
            |||||||:|||||||||.|.|.||||||||||||||||.||:|.|:.:|||
  Rat   145 GVSVEGEHHEKAVELLKAAQGKVKLVVRYTPKVLEEMESRFEKMRSAKRRQ 195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
veli	NP_733076.2	L27	14..66	CDD:460717	35/51 (69%)
		PDZ_Lin-7-like	90..226	CDD:467258	78/135 (58%)
Lin7c	NP_068623.1	Kinase interacting site. /evidence=ECO:0000250	2..13		4/10 (40%)
		L27	14..66	CDD:460717	35/51 (69%)
		PDZ_Lin-7-like	90..175	CDD:467258	78/135 (58%)