DRSC/TRiP Functional Genomics Resources

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Protein Alignment veli and Lin7b

DIOPT Version :9

Sequence 1:NP_733076.2 Gene:veli / 43003 FlyBaseID:FBgn0039269 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_068526.1 Gene:Lin7b / 60377 RGDID:620730 Length:207 Species:Rattus norvegicus


Alignment Length:246 Identity:152/246 - (61%)
Similarity:171/246 - (69%) Gaps:51/246 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADNAEPLTLSRDVKRSIELLEKLQASGDFPTTKLAALQKVLNSDFMTSVREVYEHVYETVDIQG 65
            ||...|||.|.|||.|::||||:||.||:.|..||.|||:||.|.|.:::|||||.:|:|:||.|
  Rat     1 MAALVEPLGLERDVSRAVELLERLQRSGELPPQKLQALQRVLQSRFCSAIREVYEQLYDTLDITG 65

  Fly    66 SHDVRASATAKATVAAFAASEGHAHPRVVELPKTEEGKTRPYELRIEGIPLYHKTNTLIVKVYRP 130
            |.:|||.||||||||||.||||||||||||||||:|                             
  Rat    66 SAEVRAHATAKATVAAFTASEGHAHPRVVELPKTDE----------------------------- 101

  Fly   131 RIYVSIIHLIWKALSIFNFCFSGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVN 195
                                  |||||:||||||||||||||:||||||||||||||||||||||
  Rat   102 ----------------------GLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVN 144

  Fly   196 GVSVEGENHEKAVELLKQAVGSVKLVVRYTPKVLEEMEMRFDKQRNTRRRQ 246
            |||||||:|||||||||.|.|||||||||||:||||||.||:|.|:.||||
  Rat   145 GVSVEGEHHEKAVELLKAAQGSVKLVVRYTPRVLEEMEARFEKMRSARRRQ 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veliNP_733076.2 L27 14..66 CDD:280918 29/51 (57%)
PDZ_signaling 153..223 CDD:238492 64/69 (93%)
Lin7bNP_068526.1 Kinase interacting site. /evidence=ECO:0000250 1..13 6/11 (55%)
L27 14..66 CDD:397114 29/51 (57%)
PDZ_signaling 91..172 CDD:238492 74/131 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..207 6/9 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354278
Domainoid 1 1.000 135 1.000 Domainoid score I4837
eggNOG 1 0.900 - - E1_KOG3550
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22648
Inparanoid 1 1.050 285 1.000 Inparanoid score I2769
OMA 1 1.010 - - QHG48622
OrthoDB 1 1.010 - - D1335138at2759
OrthoFinder 1 1.000 - - FOG0001780
OrthoInspector 1 1.000 - - otm45395
orthoMCL 1 0.900 - - OOG6_105974
Panther 1 1.100 - - O PTHR14063
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1136
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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