DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment veli and lin7b

DIOPT Version :9

Sequence 1:NP_733076.2 Gene:veli / 43003 FlyBaseID:FBgn0039269 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_001018569.2 Gene:lin7b / 553768 ZFINID:ZDB-GENE-041011-1 Length:207 Species:Danio rerio


Alignment Length:246 Identity:151/246 - (61%)
Similarity:166/246 - (67%) Gaps:51/246 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADNAEPLTLSRDVKRSIELLEKLQASGDFPTTKLAALQKVLNSDFMTSVREVYEHVYETVDIQG 65
            ||...|||.|.|||.|.||||::||.||..|..||.|||:||.|.|..::|||||.:|:|:||.|
Zfish     1 MAAMTEPLCLERDVCRVIELLDRLQRSGQLPPPKLQALQRVLQSKFCAAIREVYEQLYDTLDIIG 65

  Fly    66 SHDVRASATAKATVAAFAASEGHAHPRVVELPKTEEGKTRPYELRIEGIPLYHKTNTLIVKVYRP 130
            ..:|||.|||||||||||||||||||||||||||:|                             
Zfish    66 GPEVRAQATAKATVAAFAASEGHAHPRVVELPKTDE----------------------------- 101

  Fly   131 RIYVSIIHLIWKALSIFNFCFSGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVN 195
                                  |||||:||||||||||||||:||||||||.|||||||||.|||
Zfish   102 ----------------------GLGFNIMGGKEQNSPIYISRVIPGGVADRQGGLKRGDQLPSVN 144

  Fly   196 GVSVEGENHEKAVELLKQAVGSVKLVVRYTPKVLEEMEMRFDKQRNTRRRQ 246
            |||||||:|||||||||.|.||||||||||||||||||.||:|.|:.||||
Zfish   145 GVSVEGEHHEKAVELLKAAQGSVKLVVRYTPKVLEEMEARFEKMRSARRRQ 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veliNP_733076.2 L27 14..66 CDD:280918 29/51 (57%)
PDZ_signaling 153..223 CDD:238492 62/69 (90%)
lin7bNP_001018569.2 L27 14..63 CDD:280918 27/48 (56%)
PDZ_signaling 91..172 CDD:238492 72/131 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596560
Domainoid 1 1.000 134 1.000 Domainoid score I4961
eggNOG 1 0.900 - - E1_KOG3550
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22648
Inparanoid 1 1.050 278 1.000 Inparanoid score I2896
OMA 1 1.010 - - QHG48622
OrthoDB 1 1.010 - - D1335138at2759
OrthoFinder 1 1.000 - - FOG0001780
OrthoInspector 1 1.000 - - otm25321
orthoMCL 1 0.900 - - OOG6_105974
Panther 1 1.100 - - O PTHR14063
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2983
SonicParanoid 1 1.000 - - X1136
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

Return to query results.
Submit another query.