DRSC/TRiP Functional Genomics Resources

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Protein Alignment veli and LIN7C

DIOPT Version :9

Sequence 1:NP_733076.2 Gene:veli / 43003 FlyBaseID:FBgn0039269 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_060832.1 Gene:LIN7C / 55327 HGNCID:17789 Length:197 Species:Homo sapiens


Alignment Length:246 Identity:156/246 - (63%)
Similarity:172/246 - (69%) Gaps:51/246 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADNAEPLTLSRDVKRSIELLEKLQASGDFPTTKLAALQKVLNSDFMTSVREVYEHVYETVDIQG 65
            ||...||:.|.||:.|:||||||||.||:.|..||.|||:||.|:|..:||||||||||||||..
Human     1 MAALGEPVRLERDICRAIELLEKLQRSGEVPPQKLQALQRVLQSEFCNAVREVYEHVYETVDISS 65

  Fly    66 SHDVRASATAKATVAAFAASEGHAHPRVVELPKTEEGKTRPYELRIEGIPLYHKTNTLIVKVYRP 130
            |.:|||:||||||||||||||||:||||||||||||                             
Human    66 SPEVRANATAKATVAAFAASEGHSHPRVVELPKTEE----------------------------- 101

  Fly   131 RIYVSIIHLIWKALSIFNFCFSGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVN 195
                                  |||||:|||||||||||||||||||:|||||||||||||||||
Human   102 ----------------------GLGFNIMGGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVN 144

  Fly   196 GVSVEGENHEKAVELLKQAVGSVKLVVRYTPKVLEEMEMRFDKQRNTRRRQ 246
            |||||||:|||||||||.|.|.||||||||||||||||.||:|.|:.:|||
Human   145 GVSVEGEHHEKAVELLKAAQGKVKLVVRYTPKVLEEMESRFEKMRSAKRRQ 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veliNP_733076.2 L27 14..66 CDD:280918 35/51 (69%)
PDZ_signaling 153..223 CDD:238492 63/69 (91%)
LIN7CNP_060832.1 Kinase interacting site. /evidence=ECO:0000250 2..13 4/10 (40%)
L27 14..66 CDD:397114 35/51 (69%)
PDZ_signaling 91..172 CDD:238492 74/131 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160208
Domainoid 1 1.000 134 1.000 Domainoid score I5016
eggNOG 1 0.900 - - E1_KOG3550
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 285 1.000 Inparanoid score I2859
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48622
OrthoDB 1 1.010 - - D1335138at2759
OrthoFinder 1 1.000 - - FOG0001780
OrthoInspector 1 1.000 - - otm41266
orthoMCL 1 0.900 - - OOG6_105974
Panther 1 1.100 - - LDO PTHR14063
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2983
SonicParanoid 1 1.000 - - X1136
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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