DRSC/TRiP Functional Genomics Resources

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Protein Alignment veli and PDZD11

DIOPT Version :9

Sequence 1:NP_733076.2 Gene:veli / 43003 FlyBaseID:FBgn0039269 Length:246 Species:Drosophila melanogaster
Sequence 2:XP_016885057.1 Gene:PDZD11 / 51248 HGNCID:28034 Length:172 Species:Homo sapiens


Alignment Length:125 Identity:41/125 - (32%)
Similarity:65/125 - (52%) Gaps:6/125 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PY-ELRIEGIPLYHKTNTLI---VKVYRPRIYVSIIHLIWKALSIFNFCFSGLGFNVMGGKEQNS 166
            || :..:..:|.|......|   .:|:.|.....:...:.:.:::.....:.||||:.|||....
Human    38 PYDDYPVVFLPAYENPPAWIPPHERVHHPDYNNELTQFLPRTITLKKPPGAQLGFNIRGGKASQL 102

  Fly   167 PIYISRIIPGGVADRHGGLKRGDQLLSVNGVSVEGENHEKAVELLKQAVGSVKLVVRYTP 226
            .|:||::||...|.| .||:.|||:|:||.|..:...|.||||:||.| ..:.:.||:.|
Human   103 GIFISKVIPDSDAHR-AGLQEGDQVLAVNDVDFQDIEHSKAVEILKTA-REISMRVRFFP 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veliNP_733076.2 L27 14..66 CDD:280918
PDZ_signaling 153..223 CDD:238492 31/69 (45%)
PDZD11XP_016885057.1 PDZ_signaling 77..157 CDD:238492 31/81 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160211
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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