DRSC/TRiP Functional Genomics Resources

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Protein Alignment veli and Lin7c

DIOPT Version :9

Sequence 1:NP_733076.2 Gene:veli / 43003 FlyBaseID:FBgn0039269 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_035829.1 Gene:Lin7c / 22343 MGIID:1330839 Length:197 Species:Mus musculus


Alignment Length:246 Identity:156/246 - (63%)
Similarity:172/246 - (69%) Gaps:51/246 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADNAEPLTLSRDVKRSIELLEKLQASGDFPTTKLAALQKVLNSDFMTSVREVYEHVYETVDIQG 65
            ||...||:.|.||:.|:||||||||.||:.|..||.|||:||.|:|..:||||||||||||||..
Mouse     1 MAALGEPVRLERDICRAIELLEKLQRSGEVPPQKLQALQRVLQSEFCNAVREVYEHVYETVDISS 65

  Fly    66 SHDVRASATAKATVAAFAASEGHAHPRVVELPKTEEGKTRPYELRIEGIPLYHKTNTLIVKVYRP 130
            |.:|||:||||||||||||||||:||||||||||||                             
Mouse    66 SPEVRANATAKATVAAFAASEGHSHPRVVELPKTEE----------------------------- 101

  Fly   131 RIYVSIIHLIWKALSIFNFCFSGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVN 195
                                  |||||:|||||||||||||||||||:|||||||||||||||||
Mouse   102 ----------------------GLGFNIMGGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVN 144

  Fly   196 GVSVEGENHEKAVELLKQAVGSVKLVVRYTPKVLEEMEMRFDKQRNTRRRQ 246
            |||||||:|||||||||.|.|.||||||||||||||||.||:|.|:.:|||
Mouse   145 GVSVEGEHHEKAVELLKAAQGKVKLVVRYTPKVLEEMESRFEKMRSAKRRQ 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veliNP_733076.2 L27 14..66 CDD:280918 35/51 (69%)
PDZ_signaling 153..223 CDD:238492 63/69 (91%)
Lin7cNP_035829.1 Kinase interacting site. /evidence=ECO:0000250 2..13 4/10 (40%)
L27 14..66 CDD:397114 35/51 (69%)
PDZ_signaling 91..172 CDD:238492 74/131 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850583
Domainoid 1 1.000 135 1.000 Domainoid score I4948
eggNOG 1 0.900 - - E1_KOG3550
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 285 1.000 Inparanoid score I2827
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48622
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001780
OrthoInspector 1 1.000 - - otm43324
orthoMCL 1 0.900 - - OOG6_105974
Panther 1 1.100 - - LDO PTHR14063
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2983
SonicParanoid 1 1.000 - - X1136
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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