DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment veli and veli

DIOPT Version :10

Sequence 1:NP_733076.2 Gene:veli / 43003 FlyBaseID:FBgn0039269 Length:246 Species:Drosophila melanogaster
Sequence 2:XP_315884.3 Gene:veli / 1276526 VectorBaseID:AGAMI1_012451 Length:197 Species:Anopheles gambiae


Alignment Length:246 Identity:176/246 - (71%)
Similarity:185/246 - (75%) Gaps:51/246 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADNAEPLTLSRDVKRSIELLEKLQASGDFPTTKLAALQKVLNSDFMTSVREVYEHVYETVDIQG 65
            ||:..|||||::|||||||||||||.||:.|.||||||||||.|||:.:||||||||||||||||
Mosquito     1 MANVCEPLTLAKDVKRSIELLEKLQMSGEVPATKLAALQKVLQSDFLNAVREVYEHVYETVDIQG 65

  Fly    66 SHDVRASATAKATVAAFAASEGHAHPRVVELPKTEEGKTRPYELRIEGIPLYHKTNTLIVKVYRP 130
            |.|||||||||||:||||||||||||||||||||:|                             
Mosquito    66 SLDVRASATAKATIAAFAASEGHAHPRVVELPKTDE----------------------------- 101

  Fly   131 RIYVSIIHLIWKALSIFNFCFSGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVN 195
                                  |||||||||||||||||||||||||||||||||||||||||||
Mosquito   102 ----------------------GLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVN 144

  Fly   196 GVSVEGENHEKAVELLKQAVGSVKLVVRYTPKVLEEMEMRFDKQRNTRRRQ 246
            ||||||||||||||||||||||||||||||||||||||:||||||..||||
Mosquito   145 GVSVEGENHEKAVELLKQAVGSVKLVVRYTPKVLEEMELRFDKQRAARRRQ 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veliNP_733076.2 L27 14..66 CDD:460717 43/51 (84%)
PDZ_Lin-7-like 90..226 CDD:467258 83/135 (61%)
veliXP_315884.3 L27 14..66 CDD:460717 43/51 (84%)
PDZ_Lin-7-like 90..175 CDD:467258 32/84 (38%)

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