DRSC/TRiP Functional Genomics Resources

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Protein Alignment veli and Lin7a

DIOPT Version :10

Sequence 1:NP_733076.2 Gene:veli / 43003 FlyBaseID:FBgn0039269 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_001034443.1 Gene:Lin7a / 108030 MGIID:2135609 Length:233 Species:Mus musculus


Alignment Length:241 Identity:148/241 - (61%)
Similarity:168/241 - (69%) Gaps:51/241 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EPLTLSRDVKRSIELLEKLQASGDFPTTKLAALQKVLNSDFMTSVREVYEHVYETVDIQGSHDVR 70
            :||||.|||.|:||||||||.||:.|..||.:|:|||.|:|.|::||||::::||:.:.|..:.|
Mouse    21 QPLTLDRDVARAIELLEKLQESGEVPVHKLQSLKKVLQSEFCTAIREVYQYMHETITVNGCPEFR 85

  Fly    71 ASATAKATVAAFAASEGHAHPRVVELPKTEEGKTRPYELRIEGIPLYHKTNTLIVKVYRPRIYVS 135
            |.||||||||||||||||:||||||||||:|                                  
Mouse    86 ARATAKATVAAFAASEGHSHPRVVELPKTDE---------------------------------- 116

  Fly   136 IIHLIWKALSIFNFCFSGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVNGVSVE 200
                             |||||||||||||||||||||||||||:||||||||||||||||||||
Mouse   117 -----------------GLGFNVMGGKEQNSPIYISRIIPGGVAERHGGLKRGDQLLSVNGVSVE 164

  Fly   201 GENHEKAVELLKQAVGSVKLVVRYTPKVLEEMEMRFDKQRNTRRRQ 246
            ||:|||||||||.|..|||||||||||||||||.||:|.|..||||
Mouse   165 GEHHEKAVELLKAAKDSVKLVVRYTPKVLEEMEARFEKLRTARRRQ 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
veliNP_733076.2 L27 14..66 CDD:460717 28/51 (55%)
PDZ_Lin-7-like 90..226 CDD:467258 78/135 (58%)
Lin7aNP_001034443.1 Kinase interacting site 14..28 4/6 (67%)
L27 31..83 CDD:197794 28/51 (55%)
PDZ_Lin-7-like 105..190 CDD:467258 78/135 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..233
Blue background indicates that the domain is not in the aligned region.

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