DRSC/TRiP Functional Genomics Resources

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Protein Alignment stac and snt-2

DIOPT Version :10

Sequence 1:NP_651329.4 Gene:stac / 43002 FlyBaseID:FBgn0266719 Length:1153 Species:Drosophila melanogaster
Sequence 2:NP_497261.2 Gene:snt-2 / 185680 WormBaseID:WBGene00004922 Length:369 Species:Caenorhabditis elegans


Alignment Length:224 Identity:51/224 - (22%)
Similarity:94/224 - (41%) Gaps:68/224 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 THEEIYE------------AARLKEPPNV-----------RLNVEIIKAENLMSKDSNGLSDPFV 204
            |:.:.||            .|.:|:..|:           :|:|.|:.|.:|.:.|.||:|||:|
 Worm    59 TNSDYYEPVNNGTLPLSSSGALIKQYGNIHFRVEYDFEQSKLSVTIVSASDLPAMDRNGMSDPYV 123

  Fly   205 TLYLESNGSHRYNSSVKPATLNPIWEE--HFSLPITENARDEVLIVEVWDFDAAETVKEKVNKIL 267
            .:|:......::.:.:...||||.:.|  .||:|..| ...:.|::.|:|:|.            
 Worm   124 KVYVLPERKQKFETRIIRNTLNPTYNETFQFSIPFNE-LHSKTLMLVVYDYDR------------ 175

  Fly   268 DVKGVKGLSKLMKEIAVTASSGKHDNELIGRAAITLKSIPVSGLT--VWYNLEKGSKGRSRGSLL 330
                   |||               ::.:|:.::.|:||.. |:|  :...|:|..|...:...|
 Worm   176 -------LSK---------------DDKMGQLSVPLESIDF-GITTDIERPLQKPEKDDEKECRL 217

  Fly   331 VNLALS-----AEKNKSVAVQEHKNLLKL 354
            .::..|     |....::.:.|.:||.|:
 Worm   218 GDICFSTRYRPATGTVTLTIMEARNLKKM 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stacNP_651329.4 C2 152..317 CDD:472691 41/180 (23%)
MUN <637..1003 CDD:461870
C2B_Munc13-like 990..1116 CDD:175976
snt-2NP_497261.2 C2 85..206 CDD:472691 37/156 (24%)
C2B_Synaptotagmin-1 217..357 CDD:176047 7/30 (23%)
Blue background indicates that the domain is not in the aligned region.

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