DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11790 and tmx1

DIOPT Version :9

Sequence 1:NP_651326.1 Gene:CG11790 / 42999 FlyBaseID:FBgn0039265 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001016906.1 Gene:tmx1 / 549660 XenbaseID:XB-GENE-1015794 Length:263 Species:Xenopus tropicalis


Alignment Length:154 Identity:34/154 - (22%)
Similarity:68/154 - (44%) Gaps:28/154 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 VKELSDDNFEHLTQASSGATTGDWFIFFSSAECTVCQRLYAVWESV---GGKLKRKLNIARMN-S 186
            |.:::|.|:..:.:       |:|.|.|.:..|..|.:|...|..:   |..|  .:|||::: :
 Frog    25 VIDITDSNWNEVLE-------GEWMIKFYAPWCPACHKLQPEWNELADWGEDL--NVNIAKVDVT 80

  Fly   187 LESGISTATRLGVLEAPAFIFLRQGKMYKYSAKQYSPEAFVQF-AEKGYTQSHPQPVPAIPSAVN 250
            .:.|:|  .|..:...|.....:.|...||...: :.:.|:.| :|:.:....|         |:
 Frog    81 AQPGLS--GRFIITALPTIYHCKDGVFRKYQGSR-THKDFINFISEREWEAIEP---------VS 133

  Fly   251 EFLGPLQSYFAAENITSLATLSIF 274
            .::||  ..|....:::|..||::
 Frog   134 SWVGP--DSFLMSGMSALFQLSMW 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11790NP_651326.1 PDI_a_family 127..230 CDD:239259 24/107 (22%)
tmx1NP_001016906.1 PDI_a_TMX 23..123 CDD:239292 25/109 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1481386at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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