DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11790 and tmx1

DIOPT Version :9

Sequence 1:NP_651326.1 Gene:CG11790 / 42999 FlyBaseID:FBgn0039265 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001108605.1 Gene:tmx1 / 323607 ZFINID:ZDB-GENE-030131-2327 Length:284 Species:Danio rerio


Alignment Length:186 Identity:47/186 - (25%)
Similarity:78/186 - (41%) Gaps:48/186 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 VKELSDDNFEHLTQASSGATTGDWFIFFSSAECTVCQRLYAVW-ESVGGKLKRKLNIARMNSLE- 188
            ::.|:|.:::.:       .||:|.|.|.:..|..||:|..|| |..|......:|||:::..| 
Zfish    38 LRVLTDGDWQEV-------LTGEWMIEFFAPWCPACQQLEPVWTEFAGWGDDLGVNIAKVDVTEH 95

  Fly   189 SGISTATRLGVLEAPAFIFLRQGKMYKYSAKQYSPEAFVQFAEKGYTQSHPQPVPAIPSAVNEFL 253
            .|:|  .|..::..|.....:.|...:|...: |.|.|:.|.|:...|| .:|       |:.:.
Zfish    96 PGLS--GRFIIMALPTIYHCKDGVFRRYQGDR-SKEDFLSFIEEKKWQS-IEP-------VSSWF 149

  Fly   254 GPLQSYFAAENITSLATLSIF--------------------------ALVALLFVG 283
            ||  |.|....:::|..||:|                          .:||.||:|
Zfish   150 GP--SSFLMNIMSALFKLSVFIRHCHNYLTEQMGFSVWESYGIFACATIVAGLFLG 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11790NP_651326.1 PDI_a_family 127..230 CDD:239259 28/104 (27%)
tmx1NP_001108605.1 PDI_a_TMX 36..136 CDD:239292 29/107 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1481386at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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