DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11790 and tmx1

DIOPT Version :10

Sequence 1:NP_651326.1 Gene:CG11790 / 42999 FlyBaseID:FBgn0039265 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001108605.1 Gene:tmx1 / 323607 ZFINID:ZDB-GENE-030131-2327 Length:284 Species:Danio rerio


Alignment Length:186 Identity:47/186 - (25%)
Similarity:78/186 - (41%) Gaps:48/186 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 VKELSDDNFEHLTQASSGATTGDWFIFFSSAECTVCQRLYAVW-ESVGGKLKRKLNIARMNSLE- 188
            ::.|:|.:::.:       .||:|.|.|.:..|..||:|..|| |..|......:|||:::..| 
Zfish    38 LRVLTDGDWQEV-------LTGEWMIEFFAPWCPACQQLEPVWTEFAGWGDDLGVNIAKVDVTEH 95

  Fly   189 SGISTATRLGVLEAPAFIFLRQGKMYKYSAKQYSPEAFVQFAEKGYTQSHPQPVPAIPSAVNEFL 253
            .|:|  .|..::..|.....:.|...:|...: |.|.|:.|.|:...|| .:|       |:.:.
Zfish    96 PGLS--GRFIIMALPTIYHCKDGVFRRYQGDR-SKEDFLSFIEEKKWQS-IEP-------VSSWF 149

  Fly   254 GPLQSYFAAENITSLATLSIF--------------------------ALVALLFVG 283
            ||  |.|....:::|..||:|                          .:||.||:|
Zfish   150 GP--SSFLMNIMSALFKLSVFIRHCHNYLTEQMGFSVWESYGIFACATIVAGLFLG 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11790NP_651326.1 PTZ00102 27..>174 CDD:240266 15/48 (31%)
PTZ00443 125..302 CDD:185622 47/186 (25%)
tmx1NP_001108605.1 PDI_a_TMX 36..136 CDD:239292 29/107 (27%)

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