DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11790 and Tmx4

DIOPT Version :9

Sequence 1:NP_651326.1 Gene:CG11790 / 42999 FlyBaseID:FBgn0039265 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001093999.1 Gene:Tmx4 / 296182 RGDID:1305146 Length:336 Species:Rattus norvegicus


Alignment Length:213 Identity:43/213 - (20%)
Similarity:86/213 - (40%) Gaps:34/213 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 DNLEPAVKELSDDNFEHLTQAS-SGATTGDWFIFFSSAECTVCQRLYAVWESV---GGKLKRKLN 180
            :.||.|.....:...:.:|.:: :....|:|.:.|.:..|..||:..:.||:.   |..|  :::
  Rat    23 EGLEQAALPAEESRVQPMTASNWTLVMEGEWMLKFYAPWCPSCQQTDSEWETFAKNGETL--QIS 85

  Fly   181 IARMNSL-ESGISTATRLGVLEAPAFIFLRQGKMYKYSAKQYSPEAFVQFAEKGYTQSHP----- 239
            :.:::.: |.|:|  .|..|...|||...:.|...:|.......:......||.:....|     
  Rat    86 VGKVDVIQEPGLS--GRFFVTTLPAFFHAKDGIFRRYRGPGIYEDLQNYILEKKWQSVEPLTGWK 148

  Fly   240 QPVPAIPS------AVNEFLGPLQSYFAAE-NITSLATLSIFALVAL---LFVG---KKVAKIF- 290
            .|.....|      :::..:..|.:||... .|.:..:...|.:..|   ||:|   ..:::.| 
  Rat   149 SPASLTMSGMAGLFSISGKIWHLHNYFTVTLGIPAWCSYVFFVIATLVFGLFMGLILVVISECFY 213

  Fly   291 ------SSEPAKTKNKSK 302
                  |||.::.:.:|:
  Rat   214 VPLPRASSERSEQEQRSE 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11790NP_651326.1 PDI_a_family 127..230 CDD:239259 21/107 (20%)
Tmx4NP_001093999.1 Thioredoxin_like 35..135 CDD:294274 21/103 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1481386at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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