DRSC/TRiP Functional Genomics Resources

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Protein Alignment bai and tmed2

DIOPT Version :10

Sequence 1:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster
Sequence 2:XP_012820011.1 Gene:tmed2 / 734103 XenbaseID:XB-GENE-986353 Length:208 Species:Xenopus tropicalis


Alignment Length:211 Identity:49/211 - (23%)
Similarity:101/211 - (47%) Gaps:21/211 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IVCLLMACAWSSHAVMFKLSPNTQKCLKEDIQANQLVMGEFEVSDVPGQIID----YIARDTKGH 67
            :|.||...:.::......:..:.::|..|.:.:...:...|||::  |..:|    ....|.|| 
 Frog     7 LVALLCFFSATASGYFVSIDAHAEECFFEQVTSGTKMGLIFEVAE--GGFLDIDVEITGPDNKG- 68

  Fly    68 ILSQKEHITKGKFSFMSEVYDTYEICFISKVPAHQRGVIQEVSLLT------KKGVETKSYEGIG 126
             :.:.:..:.||::|.:.:..||:.||.:::..    :..::.:.|      .||.:.:: ||||
 Frog    69 -IHKGDRESSGKYTFAAHMDGTYKFCFSNRMST----MTPKIVMFTIDIGEAPKGQDMET-EGIG 127

  Fly   127 EA--SKLKPLEVDLKRLEDLSDSIVRDFVLMRKREEEMRDTNEKTNSRVLFFSIFSMCCLLGLAT 189
            |:  :....||..:..|.....::..:...|..||...|..|:.|||||:.:|.|....|:.:..
 Frog   128 ESWDAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTL 192

  Fly   190 WQVLYLRRYFKAKKLI 205
            .|:.||:|:|:.::::
 Frog   193 GQIYYLKRFFEVRRVV 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baiNP_651323.3 EMP24_GP25L 20..200 CDD:426051 45/191 (24%)
tmed2XP_012820011.1 EMP24_GP25L 20..203 CDD:426051 45/191 (24%)

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