DRSC/TRiP Functional Genomics Resources

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Protein Alignment bai and Tmed5

DIOPT Version :10

Sequence 1:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_083152.1 Gene:Tmed5 / 73130 MGIID:1921586 Length:229 Species:Mus musculus


Alignment Length:192 Identity:43/192 - (22%)
Similarity:82/192 - (42%) Gaps:15/192 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FKLSPNTQKCLKEDIQANQLVMGEFEVSDVPGQIIDYIARDTKGHILSQKEHITKGKFSFMSEVY 87
            |.|....::|..:.:.....:..|::|.|.....||:.....:|..|..::..:.|..:..:|..
Mouse    38 FTLPAGRKECFYQPMPLKASLEIEYQVLDGGELDIDFHLTSPEGRTLVFEQRKSDGVHTIETEDG 102

  Fly    88 DTYEICFISKVPAHQRGVIQEVSLLTKKGVETKSYEGIGE-ASKLKPLEVDLKRLEDLSDSI--V 149
            | |..||.:........||....:|...|.|.:..|...: .:....||:   :|||:.:||  :
Mouse   103 D-YMFCFDNTFSTISEKVIFFELILDNMGEEVQGQEDWKKYITNTDVLEM---KLEDILESINSI 163

  Fly   150 RDFV--------LMRKREEEMRDTNEKTNSRVLFFSIFSMCCLLGLATWQVLYLRRYFKAKK 203
            :..:        |:|..|...|:..|....||.|:|:.::..::.::..||..|:..|:.|:
Mouse   164 KSRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSVVNLMVMVVVSAIQVYTLKSLFEDKR 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baiNP_651323.3 EMP24_GP25L 20..200 CDD:426051 41/187 (22%)
Tmed5NP_083152.1 EMP24_GP25L 35..222 CDD:426051 41/187 (22%)

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